RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 IRF2BPLQ9H1B7 796 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 NKX2-4Q9H2Z4 354 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 ACTR10Q9NZ32 417 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 AKT3Q9Y243 479 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 IRAK3Q9Y616 596 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 MRVI1Q9Y6F6 885 aa4.48□□□□□ -1.69
RNU1-54P-201ENST00000517181 TRBV23OR9-2A0A075B6M9 112 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 RFXAPO00287 272 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 NAT2P11245 290 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 SEPHS1P49903 392 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 CAP1Q01518 475 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 GNL2Q13823 731 aaKnown RBP4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 TESK1Q15569 626 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 GTF2IRD2BQ6EKJ0 949 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 POMZP3Q6PJE2 187 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 ZC3H14Q6PJT7 736 aaKnown RBP4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 GTF2IRD2Q86UP8 949 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 FAM129CQ86XR2 697 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 FAM178BQ8IXR5 827 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 CRACR2BQ8N4Y2 399 aaPredicted RBP4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 NPLOC4Q8TAT6 608 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 MICAL1Q8TDZ2 1067 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 MMP19Q99542 508 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 ZNF408Q9H9D4 720 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 CYP26B1Q9NR63 512 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 PLA2G2DQ9UNK4 145 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 SUGT1Q9Y2Z0 365 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 HCFC2Q9Y5Z7 792 aa4.47□□□□□ -1.69
RNU1-54P-201ENST00000517181 NPHP3-ACAD11A0A0J9YXS1 232 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 C7orf72A4D263 438 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 B2RBV5 119 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 TBX1O43435 398 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 KCNH1O95259 989 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 SCG5P05408 212 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 SSBP05455 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 PAMP19021 973 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 ZNF200P98182 395 aaPredicted RBP4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 BICRALQ6AI39 1079 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 TMEM151BQ8IW70 566 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 Q8N1Y9 231 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 DPF3Q92784 378 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 TSPAN17Q96FV3 270 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 KCNC2Q96PR1 638 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 LGR4Q9BXB1 951 aa4.46□□□□□ -1.7
RNU1-54P-201ENST00000517181 A0A1W2PQ27 194 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 A0A1W2PQ64 194 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 A0A1W2PQC6 194 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 A0A1W2PQD8 194 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 ARNTLO00327 626 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 SUSD5O60279 629 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 ITGAVP06756 1048 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 THBDP07204 575 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 PLS3P13797 630 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 TACR1P25103 407 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 PRR5P85299 388 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 RBM10P98175 930 aaKnown RBP4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 ARID5AQ03989 594 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 SCRN1Q12765 414 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 TCERG1LQ5VWI1 586 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 ZNF227Q86WZ6 799 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 CPNE8Q86YQ8 564 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 LZTR1Q8N653 840 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 NETO2Q8NC67 525 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 KREMEN2Q8NCW0 462 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 PLEKHO2Q8TD55 490 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 FRS2Q8WU20 508 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 RNF38Q9H0F5 515 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 GPRC5CQ9NQ84 441 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 CLEC1BQ9P126 229 aa4.45□□□□□ -1.7
RNU1-54P-201ENST00000517181 ZC3H12DA2A288 527 aaKnown RBP4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 KLF4O43474 513 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 BUB1BO60566 1050 aaPredicted RBP4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 TRIM13O60858 407 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 NCKAP1LP55160 1127 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 HTRA3P83110 453 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 FXNQ16595 210 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 LARP1BQ659C4 914 aaKnown RBP4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 CNKSR3Q6P9H4 555 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 CCDC103Q8IW40 242 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 MARCH10Q8NA82 808 aaPredicted RBP4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 BTN2A2Q8WVV5 523 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 C1orf159Q96HA4 380 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 EPN3Q9H201 632 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 GULP1Q9UBP9 304 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 RWDD3Q9Y3V2 267 aa4.44□□□□□ -1.7
RNU1-54P-201ENST00000517181 F8W031 263 aaPredicted RBP4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 NOP56O00567 594 aaKnown RBP4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 NPHS1O60500 1241 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 GJB6O95452 261 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 ASGR2P07307 311 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 INHBBP09529 407 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 ATF2P15336 505 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 HOXC12P31275 282 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 AFF3P51826 1226 aaKnown RBP4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 SLC9A5Q14940 896 aa4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 TARBP2Q15633 366 aaKnown RBP4.43□□□□□ -1.7
RNU1-54P-201ENST00000517181 INF2Q27J81 1249 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms