RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 SHISA4Q96DD7 197 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 MAML3Q96JK9 1138 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 TAAR1Q96RJ0 339 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 APBA2Q99767 749 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 COL20A1Q9P218 1284 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 PNMA2Q9UL42 364 aa11.22□□□□□ -0.61
SCARNA16-201ENST00000515981 STXBP3O00186 592 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 SCG2P13521 617 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 AKAP17AQ02040 695 aaKnown RBP11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 MTFR1Q15390 333 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 USP17L6PQ6QN14 398 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 FCHSD1Q86WN1 690 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 RGS22Q8NE09 1264 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 TMX3Q96JJ7 454 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 ZSCAN31Q96LW9 406 aaPredicted RBP11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 GJB4Q9NTQ9 266 aa11.21□□□□□ -0.61
SCARNA16-201ENST00000515981 MCM3APO60318 1980 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 GCOM1H8Y6P7 765 aaPredicted RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 INHAP05111 366 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 POLR2MP0CAP2 368 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 FDPSP14324 419 aaKnown RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 FOSBP53539 338 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 NAPAP54920 295 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 UBE2SQ16763 222 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 CPLX2Q6PUV4 134 aaKnown RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 MCF2L2Q86YR7 1114 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 TNS4Q8IZW8 715 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 NSUN7Q8NE18 718 aaKnown RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 TRPV1Q8NER1 839 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 RNF26Q9BY78 433 aaPredicted RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 PSTPIP2Q9H939 334 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 ORC3Q9UBD5 711 aaPredicted RBP11.2□□□□□ -0.62
SCARNA16-201ENST00000515981 PLXNA1Q9UIW2 1896 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 PFASO15067 1338 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 MEIS2O14770 477 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 IGHA2P01877 340 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 HSD17B4P51659 736 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 UBXN2AP68543 259 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 TINF2Q9BSI4 451 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 LCTP09848 1927 aa11.19□□□□□ -0.62
SCARNA16-201ENST00000515981 CDKL5O76039 1030 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 DEXIO95424 95 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 HMGCRP04035 888 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 EIF2AK2P19525 551 aaKnown RBP11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 CCND3P30281 292 aaPredicted RBP11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 ALDH5A1P51649 535 aaPredicted RBP11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 TRAF1Q13077 416 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 MFSD14CQ5VZR4 134 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 ARMCX2Q7L311 632 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 EEPD1Q7L9B9 569 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 IL31RAQ8NI17 732 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 ARMC5Q96C12 935 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 ABHD8Q96I13 439 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 PGBD1Q96JS3 809 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 RMDN3Q96TC7 470 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 KCNJ14Q9UNX9 436 aa11.18□□□□□ -0.62
SCARNA16-201ENST00000515981 MYCLP12524 364 aaPredicted RBP11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 CCL5P13501 91 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 PTGS1P23219 599 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 ADCY7P51828 1080 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 GHRHRQ02643 423 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 TMEM63BQ5T3F8 832 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 ANO1Q5XXA6 986 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 TRMT44Q8IYL2 757 aaKnown RBP11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 SMARCC2Q8TAQ2 1214 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 RASGRP4Q8TDF6 673 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 CUL5Q93034 780 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 ALG1Q9BT22 464 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
SCARNA16-201ENST00000515981 ZNF236Q9UL36 1845 aa11.16□□□□□ -0.62
SCARNA16-201ENST00000515981 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
SCARNA16-201ENST00000515981 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
SCARNA16-201ENST00000515981 CNGA1P29973 690 aa11.16□□□□□ -0.62
SCARNA16-201ENST00000515981 MCM2P49736 904 aa11.16□□□□□ -0.62
SCARNA16-201ENST00000515981 MRPL12P52815 198 aaKnown RBP11.16□□□□□ -0.62
SCARNA16-201ENST00000515981 NLRP5P59047 1200 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms