RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	TMEM232	C9JQI7	657 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	IFIT2	P09913	472 aa	Known RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	ALAS1	P13196	640 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	WDR5	P61964	334 aa	Known RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	IK	Q13123	557 aa	Predicted RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	NBPF20	Q3BBV1	942 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	DUSP28	Q4G0W2	176 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	CLASRP	Q8N2M8	674 aa	Known RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	CHMP4C	Q96CF2	233 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	CEP95	Q96GE4	821 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	TRERF1	Q96PN7	1200 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	MTG1	Q9BT17	334 aa	Predicted RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	BOLA2	Q9H3K6	86 aa		12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	GPHN	Q9NQX3	736 aa	Predicted RBP	12.53	□□□□□ -0.4
CLDND1-231	ENST00000515620	PTPRS	Q13332	1948 aa		12.52	□□□□□ -0.4
CLDND1-231	ENST00000515620	MYH4	Q9Y623	1939 aa		12.52	□□□□□ -0.4
CLDND1-231	ENST00000515620	IGKV6D-41	A0A0C4DH26	115 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	MINDY4B	A8MYZ0	360 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	DCX	O43602	365 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	PRDM1	O75626	825 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	FDX1	P10109	184 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	BMP3	P12645	472 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	CPT1A	P50416	773 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	STAT2	P52630	851 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	DEFB103A	P81534	67 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	BFSP2	Q13515	415 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	UBE3C	Q15386	1083 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	TKFC	Q3LXA3	575 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	HSP90AB4P	Q58FF6	505 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	MUM1L1	Q5H9M0	696 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	SLFN13	Q68D06	897 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	GMCL1P1	Q8NEA9	526 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	OR6J1	Q8NGC5	347 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	PURB	Q96QR8	312 aa	Known RBP	12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	WDR11	Q9BZH6	1224 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	PUS7L	Q9H0K6	701 aa	Known RBP	12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	SUGCT	Q9HAC7	445 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	MTMR4	Q9NYA4	1195 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	CYP39A1	Q9NYL5	469 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	NOD1	Q9Y239	953 aa		12.52	□□□□□ -0.41
CLDND1-231	ENST00000515620	TTLL1	O95922	423 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	RLBP1	P12271	317 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	CHMP4BP1	P59074	171 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	SNAP25	P60880	206 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	SBK1	Q52WX2	424 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	NSMF	Q6X4W1	530 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	KIF1BP	Q96EK5	621 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	TGS1	Q96RS0	853 aa	Known RBP	12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	KCNH6	Q9H252	994 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	SYNPO2	Q9UMS6	1093 aa		12.51	□□□□□ -0.41
CLDND1-231	ENST00000515620	LCT	P09848	1927 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	GRXCR2	A6NFK2	248 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620		H3BQ06	376 aa	Predicted RBP	12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	ERVK-21	P61565	698 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	NFRKB	Q6P4R8	1299 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	FAM160B2	Q86V87	743 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	MORC4	Q8TE76	937 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	ANKS1A	Q92625	1134 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	MKL1	Q969V6	931 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	CRBN	Q96SW2	442 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	TET1	Q8NFU7	2136 aa		12.5	□□□□□ -0.41
CLDND1-231	ENST00000515620	SCN10A	Q9Y5Y9	1956 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	MYH7	P12883	1935 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	RAD50	Q92878	1312 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	LINC01553	A4QN01	128 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	GSG1L2	A8MUP6	293 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	ATP5J	P18859	108 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	PTGIS	Q16647	500 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	BRDT	Q58F21	947 aa	Predicted RBP	12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	FAM117B	Q6P1L5	589 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	HFE2	Q6ZVN8	426 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	CCDC155	Q8N6L0	562 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	CHURC1	Q8WUH1	139 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	STAG1	Q8WVM7	1258 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	STRBP	Q96SI9	672 aa	Known RBP	12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	HAUS7	Q99871	368 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	CCPG1	Q9ULG6	757 aa		12.49	□□□□□ -0.41
CLDND1-231	ENST00000515620	SI	P14410	1827 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	PLIN4	Q96Q06	1357 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	RBAK-RBAKDN	I3L0D1	243 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	GJB5	O95377	273 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	SLC1A4	P43007	532 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	ALDH5A1	P51649	535 aa	Predicted RBP	12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	PTPN11	Q06124	597 aa	Predicted RBP	12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	PPP2R5B	Q15173	497 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	PUS10	Q3MIT2	529 aa	Known RBP	12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	ZSCAN25	Q6NSZ9	544 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	CNKSR3	Q6P9H4	555 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	KCTD1	Q719H9	257 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	LRRC8D	Q7L1W4	858 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	FBXO22	Q8NEZ5	403 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	AFAP1L1	Q8TED9	768 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	GMCL1	Q96IK5	515 aa		12.48	□□□□□ -0.41
CLDND1-231	ENST00000515620	PHOX2B	Q99453	314 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms