RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 MTIF3Q9H2K0 278 aaKnown RBP21.69■■□□□ 1.06
SPOP-220ENST00000515508 CXXC1Q9P0U4 656 aaPredicted RBP21.69■■□□□ 1.06
SPOP-220ENST00000515508 PSMC6P62333 389 aa21.68■■□□□ 1.06
SPOP-220ENST00000515508 RAB30Q15771 203 aa21.68■■□□□ 1.06
SPOP-220ENST00000515508 MCMDC2Q4G0Z9 681 aa21.68■■□□□ 1.06
SPOP-220ENST00000515508 TRPV6Q9H1D0 765 aa21.68■■□□□ 1.06
SPOP-220ENST00000515508 TOMM22Q9NS69 142 aa21.68■■□□□ 1.06
SPOP-220ENST00000515508 LAMA4Q16363 1823 aa21.68■■□□□ 1.06
SPOP-220ENST00000515508 SCN10AQ9Y5Y9 1956 aa21.67■■□□□ 1.06
SPOP-220ENST00000515508 FRMPD2Q68DX3 1309 aaPredicted RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 RBM47A0AV96 593 aaKnown RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 FGBP02675 491 aa21.67■■□□□ 1.06
SPOP-220ENST00000515508 HSPD1P10809 573 aaKnown RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 PDHBP11177 359 aa21.67■■□□□ 1.06
SPOP-220ENST00000515508 HDAC1Q13547 482 aaPredicted RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 RRP12Q5JTH9 1297 aaKnown RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 ZNF589Q86UQ0 364 aaPredicted RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 SYMPKQ92797 1274 aaKnown RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 GAS2L1Q99501 681 aaPredicted RBP21.67■■□□□ 1.06
SPOP-220ENST00000515508 PNMA2Q9UL42 364 aa21.67■■□□□ 1.06
SPOP-220ENST00000515508 WDR19Q8NEZ3 1342 aa21.66■■□□□ 1.06
SPOP-220ENST00000515508 PTPDC1A2A3K4 754 aa21.66■■□□□ 1.06
SPOP-220ENST00000515508 SNHG28P0DPA3 235 aa21.66■■□□□ 1.06
SPOP-220ENST00000515508 PCP11498 1178 aaKnown RBP21.66■■□□□ 1.06
SPOP-220ENST00000515508 SLC30A10Q6XR72 485 aa21.66■■□□□ 1.06
SPOP-220ENST00000515508 CLEC4DQ8WXI8 215 aa21.66■■□□□ 1.06
SPOP-220ENST00000515508 ALDH8A1Q9H2A2 487 aaPredicted RBP21.66■■□□□ 1.06
SPOP-220ENST00000515508 POLR3EQ9NVU0 708 aa21.66■■□□□ 1.06
SPOP-220ENST00000515508 TANC1Q9C0D5 1861 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 CCDC171Q6TFL3 1326 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 CCL23P55773 120 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 PURAQ00577 322 aaKnown RBP21.65■■□□□ 1.06
SPOP-220ENST00000515508 ZNF543Q08ER8 600 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 TJAP1Q5JTD0 557 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 AKNAD1Q5T1N1 836 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 VWCEQ96DN2 955 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 TTC14Q96N46 770 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 WDR11Q9BZH6 1224 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 PRDM12Q9H4Q4 367 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 MSRAQ9UJ68 235 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 MYO9BQ13459 2157 aa21.65■■□□□ 1.06
SPOP-220ENST00000515508 TRANK1O15050 2925 aa21.64■■□□□ 1.06
SPOP-220ENST00000515508 EDNRBP24530 442 aa21.64■■□□□ 1.05
SPOP-220ENST00000515508 CPT1AP50416 773 aa21.64■■□□□ 1.05
SPOP-220ENST00000515508 NMIQ13287 307 aaPredicted RBP21.64■■□□□ 1.05
SPOP-220ENST00000515508 RNF207Q6ZRF8 634 aa21.64■■□□□ 1.05
SPOP-220ENST00000515508 OTOP2Q7RTS6 562 aa21.64■■□□□ 1.05
SPOP-220ENST00000515508 CRBNQ96SW2 442 aa21.64■■□□□ 1.05
SPOP-220ENST00000515508 HAND2P61296 217 aa21.63■■□□□ 1.05
SPOP-220ENST00000515508 TBC1D10CQ8IV04 446 aa21.63■■□□□ 1.05
SPOP-220ENST00000515508 RPUSD2Q8IZ73 545 aaKnown RBP21.63■■□□□ 1.05
SPOP-220ENST00000515508 DNERQ8NFT8 737 aa21.63■■□□□ 1.05
SPOP-220ENST00000515508 YBX2Q9Y2T7 364 aaKnown RBP21.63■■□□□ 1.05
SPOP-220ENST00000515508 NKRFO15226 690 aaKnown RBP eCLIP21.62■■□□□ 1.05
SPOP-220ENST00000515508 SUPT20HL2P0C7V6 817 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 CALML3P27482 149 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 RPS6P62753 249 aaKnown RBP21.62■■□□□ 1.05
SPOP-220ENST00000515508 ADGRE1Q14246 886 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 MFSD6Q6ZSS7 791 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 NKX2-4Q9H2Z4 354 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 TRMT13Q9NUP7 481 aaKnown RBP21.62■■□□□ 1.05
SPOP-220ENST00000515508 REV3LO60673 3130 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 SCN5AQ14524 2016 aa21.62■■□□□ 1.05
SPOP-220ENST00000515508 TNKSO95271 1327 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 PFKMP08237 780 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 PPP2R5BQ15173 497 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 OR6J1Q8NGC5 347 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 SCLYQ96I15 445 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 MPHOSPH6Q99547 160 aaKnown RBP21.61■■□□□ 1.05
SPOP-220ENST00000515508 MTG1Q9BT17 334 aaPredicted RBP21.61■■□□□ 1.05
SPOP-220ENST00000515508 SLC28A3Q9HAS3 691 aa21.61■■□□□ 1.05
SPOP-220ENST00000515508 NEDD4P46934 1319 aa21.6■■□□□ 1.05
SPOP-220ENST00000515508 RAD50Q92878 1312 aa21.6■■□□□ 1.05
SPOP-220ENST00000515508 MYL3P08590 195 aa21.6■■□□□ 1.05
SPOP-220ENST00000515508 PDE4DQ08499 809 aa21.6■■□□□ 1.05
SPOP-220ENST00000515508 GPATCH4Q5T3I0 446 aaKnown RBP21.6■■□□□ 1.05
SPOP-220ENST00000515508 RNF41Q9H4P4 317 aaPredicted RBP21.6■■□□□ 1.05
SPOP-220ENST00000515508 PRDM6Q9NQX0 595 aa21.6■■□□□ 1.05
SPOP-220ENST00000515508 SLC4A7Q9Y6M7 1214 aa21.6■■□□□ 1.05
SPOP-220ENST00000515508 A6NJR5 290 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 TRIM6-TRIM34B2RNG4 842 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 CYP2C9P11712 490 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 NT5C2P49902 561 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 MFAP1P55081 439 aaKnown RBP21.59■■□□□ 1.05
SPOP-220ENST00000515508 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
SPOP-220ENST00000515508 RGS22Q8NE09 1264 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 ATXN2LQ8WWM7 1075 aaKnown RBP21.59■■□□□ 1.05
SPOP-220ENST00000515508 ESR2Q92731 530 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
SPOP-220ENST00000515508 PCDHA11Q9Y5I1 949 aa21.59■■□□□ 1.05
SPOP-220ENST00000515508 NFRKBQ6P4R8 1299 aa21.58■■□□□ 1.05
SPOP-220ENST00000515508 DGKHQ86XP1 1220 aa21.58■■□□□ 1.05
SPOP-220ENST00000515508 LNPKQ9C0E8 428 aa21.58■■□□□ 1.05
SPOP-220ENST00000515508 MAF1Q9H063 256 aa21.58■■□□□ 1.05
SPOP-220ENST00000515508 THEGQ9P2T0 379 aa21.58■■□□□ 1.05
SPOP-220ENST00000515508 KIAA1217Q5T5P2 1943 aa21.57■■□□□ 1.04
SPOP-220ENST00000515508 XIRP2A4UGR9 3374 aa21.57■■□□□ 1.04
SPOP-220ENST00000515508 KPNA6O60684 536 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms