RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 TNFAIP2Q03169 654 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 TROAPQ12815 778 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 SART3Q15020 963 aaKnown RBP15.22■□□□□ 0.03
CDK7-213ENST00000515391 CCSAPQ6IQ19 270 aaPredicted RBP15.22■□□□□ 0.03
CDK7-213ENST00000515391 MORC4Q8TE76 937 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 NUP133Q8WUM0 1156 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 LRRC2Q9BYS8 371 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
CDK7-213ENST00000515391 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
CDK7-213ENST00000515391 ABCB11O95342 1321 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 CTAGE5O15320 804 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 SLC34A2O95436 690 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 FXR1P51114 621 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDK7-213ENST00000515391 GJA9P57773 515 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 SNX17Q15036 470 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 HOMER1Q86YM7 354 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 RAB11FIP4Q86YS3 637 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 MTMR8Q96EF0 704 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 TAAR1Q96RJ0 339 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 PIGSQ96S52 555 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 UPF3AQ9H1J1 476 aaKnown RBP15.21■□□□□ 0.03
CDK7-213ENST00000515391 COL20A1Q9P218 1284 aa15.21■□□□□ 0.03
CDK7-213ENST00000515391 GNEQ9Y223 722 aaKnown RBP15.21■□□□□ 0.03
CDK7-213ENST00000515391 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.02
CDK7-213ENST00000515391 SH2B2O14492 632 aaPredicted RBP15.2■□□□□ 0.02
CDK7-213ENST00000515391 DYNC1LI2O43237 492 aaPredicted RBP15.2■□□□□ 0.02
CDK7-213ENST00000515391 CYTH3O43739 400 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 ASGR1P07306 291 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 MCM5P33992 734 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 TLE2Q04725 743 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 GNASQ5JWF2 1037 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 SH3RF1Q7Z6J0 888 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 CATIPQ7Z7H3 387 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 ZNF654Q8IZM8 581 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 SYTL5Q8TDW5 730 aaPredicted RBP15.2■□□□□ 0.02
CDK7-213ENST00000515391 TSEN34Q9BSV6 310 aaKnown RBP15.2■□□□□ 0.02
CDK7-213ENST00000515391 AMNQ9BXJ7 453 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 SPC25Q9HBM1 224 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 VTA1Q9NP79 307 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 PRDM5Q9NQX1 630 aaPredicted RBP15.2■□□□□ 0.02
CDK7-213ENST00000515391 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
CDK7-213ENST00000515391 MRPL11Q9Y3B7 192 aaKnown RBP15.2■□□□□ 0.02
CDK7-213ENST00000515391 OPLAHO14841 1288 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 ZBTB5O15062 677 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 RXRAP19793 462 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 CST5P28325 142 aaPredicted RBP15.19■□□□□ 0.02
CDK7-213ENST00000515391 PDE4DQ08499 809 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 IQSEC1Q6DN90 963 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 NFXL1Q6ZNB6 911 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 RGS22Q8NE09 1264 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 VTI1AQ96AJ9 217 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 TCEANC2Q96MN5 208 aa15.19■□□□□ 0.02
CDK7-213ENST00000515391 TRIOBPQ9H2D6 2365 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 MOXD2PA6NHM9 499 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 PQBP1O60828 265 aaKnown RBP15.18■□□□□ 0.02
CDK7-213ENST00000515391 CFBP00751 764 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 TLK2Q86UE8 772 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
CDK7-213ENST00000515391 PCSK9Q8NBP7 692 aaKnown RBP15.18■□□□□ 0.02
CDK7-213ENST00000515391 DNERQ8NFT8 737 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 WDR11Q9BZH6 1224 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
CDK7-213ENST00000515391 AP5M1Q9H0R1 490 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 PDLIM7Q9NR12 457 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 PCDHA1Q9Y5I3 950 aa15.18■□□□□ 0.02
CDK7-213ENST00000515391 TRIM43BA6NCK2 446 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 SOX1O00570 391 aaPredicted RBP15.17■□□□□ 0.02
CDK7-213ENST00000515391 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 EDNRBP24530 442 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 BMP8BP34820 402 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
CDK7-213ENST00000515391 FSCN1Q16658 493 aaKnown RBP15.17■□□□□ 0.02
CDK7-213ENST00000515391 C1orf53Q5VUE5 145 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 CXCL17Q6UXB2 119 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 COPS5Q92905 334 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 TRIM43Q96BQ3 446 aaPredicted RBP15.17■□□□□ 0.02
CDK7-213ENST00000515391 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 GLT1D1Q96MS3 346 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 PRKAG2Q9UGJ0 569 aa15.17■□□□□ 0.02
CDK7-213ENST00000515391 LOC102724159A0A0B4J2E5 919 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 RBM47A0AV96 593 aaKnown RBP15.16■□□□□ 0.02
CDK7-213ENST00000515391 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 DDAH1O94760 285 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 ITGB8P26012 769 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 HOXA13P31271 388 aaPredicted RBP15.16■□□□□ 0.02
CDK7-213ENST00000515391 NKX3-2P78367 333 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 PWP2Q15269 919 aaKnown RBP15.16■□□□□ 0.02
CDK7-213ENST00000515391 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 RNF20Q5VTR2 975 aa15.16■□□□□ 0.02
CDK7-213ENST00000515391 CTCFLQ8NI51 663 aaPredicted RBP15.16■□□□□ 0.02
CDK7-213ENST00000515391 BADQ92934 168 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms