RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-224ENST00000515316 CACNB2Q08289 660 aaPredicted RBP29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 TRIM32Q13049 653 aa29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 MAP3K21Q5TCX8 1036 aa29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 RNF26Q9BY78 433 aaPredicted RBP29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 HMX1Q9NP08 348 aaPredicted RBP29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 RPTORQ8N122 1335 aa29.16■■■□□ 2.26
SPOCK3-224ENST00000515316 LOC102724159A0A0B4J2E5 919 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 SOWAHBA6NEL2 793 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 ASB14A6NK59 587 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 hCG_1984214I3L0E3 225 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 CCL5P13501 91 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 PWP2Q15269 919 aaKnown RBP29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 SLC30A10Q6XR72 485 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 NOL8Q76FK4 1167 aaKnown RBP29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 TRIM22Q8IYM9 498 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 ZNF713Q8N859 430 aaPredicted RBP29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 TBC1D5Q92609 795 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 NRBP1Q9UHY1 535 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 SYNGAP1Q96PV0 1343 aa29.15■■■□□ 2.26
SPOCK3-224ENST00000515316 B4DLN1 442 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 GCOM1H8Y6P7 765 aaPredicted RBP29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 ST18O60284 1047 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 CDKL5O76039 1030 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 MYCP01106 439 aaPredicted RBP29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 POLR2MP0CAP2 368 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 MRPL12P52815 198 aaKnown RBP29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 GHRHRQ02643 423 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 SCRN1Q12765 414 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 MTFR1Q15390 333 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 HEATR3Q7Z4Q2 680 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 DNERQ8NFT8 737 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 MPHOSPH6Q99547 160 aaKnown RBP29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 RNF208Q9H0X6 261 aa29.14■■■□□ 2.26
SPOCK3-224ENST00000515316 OPLAHO14841 1288 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 HSD17B4P51659 736 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 SSRP1Q08945 709 aaKnown RBP29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 ME3Q16798 604 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 PFKFB3Q16875 520 aaPredicted RBP29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 SYTL5Q8TDW5 730 aaPredicted RBP29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 PHKBQ93100 1093 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 ZSCAN31Q96LW9 406 aaPredicted RBP29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 FGD4Q96M96 766 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 SLC26A6Q9BXS9 759 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 UNC93B1Q9H1C4 597 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 CNPY2Q9Y2B0 182 aa29.13■■■□□ 2.25
SPOCK3-224ENST00000515316 PLXNA1Q9UIW2 1896 aa29.12■■■□□ 2.25
SPOCK3-224ENST00000515316 CUL5Q93034 780 aa29.12■■■□□ 2.25
SPOCK3-224ENST00000515316 SCG2P13521 617 aa29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 WWC2Q6AWC2 1192 aa29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 PPP1R18Q6NYC8 613 aa29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 GPKOWQ92917 476 aaPredicted RBP eCLIP29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 PSTPIP2Q9H939 334 aa29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 BARHL2Q9NY43 387 aa29.11■■■□□ 2.25
SPOCK3-224ENST00000515316 ALDH5A1P51649 535 aaPredicted RBP29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 NAPAP54920 295 aa29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 ARMCX2Q7L311 632 aa29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 TEX2Q8IWB9 1127 aa29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 NSUN6Q8TEA1 469 aaKnown RBP29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 PURBQ96QR8 312 aaKnown RBP29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.1■■■□□ 2.25
SPOCK3-224ENST00000515316 HTTP42858 3142 aa29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 GJB1P08034 283 aa29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 CCDC12Q8WUD4 166 aaPredicted RBP29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 GTF3C6Q969F1 213 aa29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 TAAR1Q96RJ0 339 aa29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 RMDN3Q96TC7 470 aa29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 ABHD16BQ9H3Z7 469 aa29.09■■■□□ 2.25
SPOCK3-224ENST00000515316 SNAI1O95863 264 aaPredicted RBP29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 CYBAP13498 195 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 CAPN2P17655 700 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 CNGA1P29973 690 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 PKN1Q16512 942 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 PRAMEF19Q5SWL8 479 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 NECAB1Q8N987 351 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 SMARCC2Q8TAQ2 1214 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 MORC4Q8TE76 937 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 GLT8D2Q9H1C3 349 aa29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 PAK6Q9NQU5 681 aaPredicted RBP29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 SH2B1Q9NRF2 756 aaPredicted RBP29.08■■■□□ 2.25
SPOCK3-224ENST00000515316 STXBP3O00186 592 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 PIK3CDO00329 1044 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 ASTN1O14525 1302 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 DEXIO95424 95 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 CCND3P30281 292 aaPredicted RBP29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 HOXA13P31271 388 aaPredicted RBP29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 MCM2P49736 904 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 ARHGEF16Q5VV41 709 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 IWS1Q96ST2 819 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 COL20A1Q9P218 1284 aa29.07■■■□□ 2.24
SPOCK3-224ENST00000515316 MSCO60682 206 aa29.06■■■□□ 2.24
SPOCK3-224ENST00000515316 LARGE1O95461 756 aa29.06■■■□□ 2.24
SPOCK3-224ENST00000515316 ACVR2BQ13705 512 aa29.06■■■□□ 2.24
SPOCK3-224ENST00000515316 TRPV1Q8NER1 839 aa29.06■■■□□ 2.24
SPOCK3-224ENST00000515316 SMCO2A6NFE2 343 aa29.05■■■□□ 2.24
SPOCK3-224ENST00000515316 SEPT4O43236 478 aa29.05■■■□□ 2.24
SPOCK3-224ENST00000515316 PPFIA3O75145 1194 aa29.05■■■□□ 2.24
SPOCK3-224ENST00000515316 PDE4DQ08499 809 aa29.05■■■□□ 2.24
SPOCK3-224ENST00000515316 FCHSD1Q86WN1 690 aa29.05■■■□□ 2.24
SPOCK3-224ENST00000515316 DEFB118Q96PH6 123 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms