RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 CFBP00751 764 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 TM4SF4P48230 202 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 GRM1Q13255 1194 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 NBR1Q14596 966 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 Q3C1V9 767 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 KRT25Q7Z3Z0 450 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 GTF3C2Q8WUA4 911 aaPredicted RBP19.22■□□□□ 0.67
AP3S1-208ENST00000515066 MOV10L1Q9BXT6 1211 aaKnown RBP19.22■□□□□ 0.67
AP3S1-208ENST00000515066 CNPY2Q9Y2B0 182 aa19.22■□□□□ 0.67
AP3S1-208ENST00000515066 CCDC194A0A1B0GVG4 234 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 EDIL3O43854 480 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 ERVK-9P63128 1117 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 ERVK-24P63145 666 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 SREBF2Q12772 1141 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 NOGQ13253 232 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 TKFCQ3LXA3 575 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 COL20A1Q9P218 1284 aa19.21■□□□□ 0.67
AP3S1-208ENST00000515066 TFIP11Q9UBB9 837 aaKnown RBP19.21■□□□□ 0.67
AP3S1-208ENST00000515066 GCOM1H8Y6P7 765 aaPredicted RBP19.2■□□□□ 0.66
AP3S1-208ENST00000515066 AOC2O75106 756 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 POLR2MP0CAP2 368 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 GCLCP48506 637 aaPredicted RBP19.2■□□□□ 0.66
AP3S1-208ENST00000515066 KRT85P78386 507 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 HTRA3P83110 453 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 AP3B2Q13367 1082 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 NONOQ15233 471 aaKnown RBP eCLIP19.2■□□□□ 0.66
AP3S1-208ENST00000515066 INF2Q27J81 1249 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 RILPL1Q5EBL4 403 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 CRYGNQ8WXF5 182 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 ATL3Q6DD88 541 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 SLC30A10Q6XR72 485 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 MCF2L2Q86YR7 1114 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 ANKRD13CQ8N6S4 541 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 TBCKQ8TEA7 893 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 GBP4Q96PP9 640 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 ANO3Q9BYT9 981 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 ACAD9Q9H845 621 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 GDPD2Q9HCC8 539 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 POLR3EQ9NVU0 708 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 MORF4L1Q9UBU8 362 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 CLIC4Q9Y696 253 aa19.2■□□□□ 0.66
AP3S1-208ENST00000515066 TRAPPC10P48553 1259 aa19.19■□□□□ 0.66
AP3S1-208ENST00000515066 RPS6P62753 249 aaKnown RBP19.19■□□□□ 0.66
AP3S1-208ENST00000515066 CHST13Q8NET6 341 aa19.19■□□□□ 0.66
AP3S1-208ENST00000515066 ZNF396Q96N95 335 aaPredicted RBP19.19■□□□□ 0.66
AP3S1-208ENST00000515066 A1CFQ9NQ94 594 aaKnown RBP19.19■□□□□ 0.66
AP3S1-208ENST00000515066 MCM3APO60318 1980 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 MGAMO43451 1857 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
AP3S1-208ENST00000515066 ERCC3P19447 782 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 NASPP49321 788 aaPredicted RBP19.18■□□□□ 0.66
AP3S1-208ENST00000515066 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
AP3S1-208ENST00000515066 TAF1CQ15572 869 aaPredicted RBP19.18■□□□□ 0.66
AP3S1-208ENST00000515066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.18■□□□□ 0.66
AP3S1-208ENST00000515066 SAMD3Q8N6K7 520 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 PORCNQ9H237 461 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 MAP3K20Q9NYL2 800 aaKnown RBP19.18■□□□□ 0.66
AP3S1-208ENST00000515066 RTEL1Q9NZ71 1219 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 KIAA1217Q5T5P2 1943 aa19.18■□□□□ 0.66
AP3S1-208ENST00000515066 FIBPO43427 364 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 SLC25A27O95847 323 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 FOSP01100 380 aaPredicted RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 FAM110CQ1W6H9 321 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 ANO1Q5XXA6 986 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 NSMFQ6X4W1 530 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 FCHSD1Q86WN1 690 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 SYTL5Q8TDW5 730 aaPredicted RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 CYP39A1Q9NYL5 469 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 LRRC37A2A6NM11 1700 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 SPDYE3A6NKU9 549 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 BCRP11274 1271 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 ATP2B1P20020 1258 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 SREBF1P36956 1147 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 BAATQ14032 418 aaPredicted RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 PTPAQ15257 358 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 SF3A1Q15459 793 aaKnown RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 TTC38Q5R3I4 469 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 RNF207Q6ZRF8 634 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 NEK8Q86SG6 692 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 NCAPG2Q86XI2 1143 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 GPRC5AQ8NFJ5 357 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 LEO1Q8WVC0 666 aaPredicted RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 CFAP45Q9UL16 551 aa19.17■□□□□ 0.66
AP3S1-208ENST00000515066 NOL7Q9UMY1 257 aaKnown RBP19.17■□□□□ 0.66
AP3S1-208ENST00000515066 FRMPD4Q14CM0 1322 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 RPTORQ8N122 1335 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 MCM4P33991 863 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 CRHR2Q13324 411 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 TMEM87AQ8NBN3 555 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 LINC00301Q8NCQ3 95 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 SHCBP1Q8NEM2 672 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
AP3S1-208ENST00000515066 SCAND2PQ9GZW5 306 aaPredicted RBP19.16■□□□□ 0.66
AP3S1-208ENST00000515066 MAF1Q9H063 256 aa19.16■□□□□ 0.66
AP3S1-208ENST00000515066 RCOR1Q9UKL0 485 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms