RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 TRIP12Q14669 1992 aaPredicted RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 GRIN2DO15399 1336 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 PALM3A6NDB9 673 aaPredicted RBP17.15■□□□□ 0.34
SGCA-211ENST00000514934 E7EWF7 191 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 ASGR1P07306 291 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 GHRHRQ02643 423 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 FAAP100Q0VG06 881 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 QRICH1Q2TAL8 776 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 SLC43A3Q8NBI5 491 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 RGS22Q8NE09 1264 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 TOX2Q96NM4 488 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 UBE2OQ9C0C9 1292 aaKnown RBP17.15■□□□□ 0.34
SGCA-211ENST00000514934 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 VTA1Q9NP79 307 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
SGCA-211ENST00000514934 TANC1Q9C0D5 1861 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 UNC80Q8N2C7 3258 aa17.15■□□□□ 0.34
SGCA-211ENST00000514934 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
SGCA-211ENST00000514934 EPHB4P54760 987 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 BEX3Q00994 111 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 TROAPQ12815 778 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 RNF207Q6ZRF8 634 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
SGCA-211ENST00000514934 ELP1O95163 1332 aa17.14■□□□□ 0.33
SGCA-211ENST00000514934 CYTH3O43739 400 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 CLTBP09497 229 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 PARP1P09874 1014 aaKnown RBP17.13■□□□□ 0.33
SGCA-211ENST00000514934 GRM4Q14833 912 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
SGCA-211ENST00000514934 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 EEPD1Q7L9B9 569 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 TLK2Q86UE8 772 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 TET1Q8NFU7 2136 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 BADQ92934 168 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 STARD7Q9NQZ5 370 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 Q9Y3F1 56 aa17.13■□□□□ 0.33
SGCA-211ENST00000514934 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 USH1GQ495M9 461 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 DUSP28Q4G0W2 176 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 C9orf50Q5SZB4 431 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 GPR153Q6NV75 609 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 FAM126BQ8IXS8 530 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 PCSK9Q8NBP7 692 aaKnown RBP17.12■□□□□ 0.33
SGCA-211ENST00000514934 ESYT1Q9BSJ8 1104 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 MAF1Q9H063 256 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
SGCA-211ENST00000514934 ADD3Q9UEY8 706 aaKnown RBP17.12■□□□□ 0.33
SGCA-211ENST00000514934 ABCB11O95342 1321 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
SGCA-211ENST00000514934 TRANK1O15050 2925 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
SGCA-211ENST00000514934 CD4P01730 458 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 CALML3P27482 149 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 FSCN1Q16658 493 aaKnown RBP17.11■□□□□ 0.33
SGCA-211ENST00000514934 BMP2KLQ5H9B9 411 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
SGCA-211ENST00000514934 CHST3Q7LGC8 479 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 DNERQ8NFT8 737 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
SGCA-211ENST00000514934 NUP133Q8WUM0 1156 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 REV3LO60673 3130 aa17.11■□□□□ 0.33
SGCA-211ENST00000514934 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 ARVCFO00192 962 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 ARIH2O95376 493 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 SHHQ15465 462 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 CXCL17Q6UXB2 119 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
SGCA-211ENST00000514934 PRDM5Q9NQX1 630 aaPredicted RBP17.1■□□□□ 0.33
SGCA-211ENST00000514934 DYNC1LI2O43237 492 aaPredicted RBP17.09■□□□□ 0.33
SGCA-211ENST00000514934 HSD17B4P51659 736 aa17.09■□□□□ 0.33
SGCA-211ENST00000514934 CCDC62Q6P9F0 684 aa17.09■□□□□ 0.33
SGCA-211ENST00000514934 NCOA7Q8NI08 942 aa17.09■□□□□ 0.33
SGCA-211ENST00000514934 GLT1D1Q96MS3 346 aa17.09■□□□□ 0.33
SGCA-211ENST00000514934 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
SGCA-211ENST00000514934 LBHD1Q9BQE6 289 aaPredicted RBP17.09■□□□□ 0.33
SGCA-211ENST00000514934 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
SGCA-211ENST00000514934 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
SGCA-211ENST00000514934 SLC27A2O14975 620 aa17.08■□□□□ 0.32
SGCA-211ENST00000514934 KIAA1211Q6ZU35 1233 aa17.08■□□□□ 0.32
SGCA-211ENST00000514934 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
SGCA-211ENST00000514934 VWCEQ96DN2 955 aa17.08■□□□□ 0.32
SGCA-211ENST00000514934 WDR11Q9BZH6 1224 aa17.08■□□□□ 0.32
SGCA-211ENST00000514934 SPC25Q9HBM1 224 aa17.08■□□□□ 0.32
SGCA-211ENST00000514934 DLL1O00548 723 aa17.07■□□□□ 0.32
SGCA-211ENST00000514934 ZBTB5O15062 677 aa17.07■□□□□ 0.32
SGCA-211ENST00000514934 PURAQ00577 322 aaKnown RBP17.07■□□□□ 0.32
SGCA-211ENST00000514934 Q7L0L9 218 aa17.07■□□□□ 0.32
SGCA-211ENST00000514934 C16orf59Q7L2K0 433 aa17.07■□□□□ 0.32
SGCA-211ENST00000514934 COPS5Q92905 334 aa17.07■□□□□ 0.32
SGCA-211ENST00000514934 VAT1LQ9HCJ6 419 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms