RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TAPT1Q6NXT6 567 aa28.53■■■□□ 2.16
SNF8-213ENST00000514929 RGS22Q8NE09 1264 aa28.53■■■□□ 2.16
SNF8-213ENST00000514929 UBE2OQ9C0C9 1292 aaKnown RBP28.53■■■□□ 2.16
SNF8-213ENST00000514929 SENP2Q9HC62 589 aa28.53■■■□□ 2.16
SNF8-213ENST00000514929 PALM3A6NDB9 673 aaPredicted RBP28.52■■■□□ 2.16
SNF8-213ENST00000514929 ANTXR2P58335 489 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 TLE2Q04725 743 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 GRM4Q14833 912 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 CASC1Q6TDU7 716 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 TLK2Q86UE8 772 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 DNERQ8NFT8 737 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 GLT1D1Q96MS3 346 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 AP5M1Q9H0R1 490 aa28.52■■■□□ 2.16
SNF8-213ENST00000514929 MRPL11Q9Y3B7 192 aaKnown RBP28.52■■■□□ 2.16
SNF8-213ENST00000514929 SLC27A2O14975 620 aa28.51■■■□□ 2.15
SNF8-213ENST00000514929 ASGR1P07306 291 aa28.51■■■□□ 2.15
SNF8-213ENST00000514929 SMPD1P17405 629 aa28.51■■■□□ 2.15
SNF8-213ENST00000514929 PDE4DQ08499 809 aa28.51■■■□□ 2.15
SNF8-213ENST00000514929 CATIPQ7Z7H3 387 aa28.51■■■□□ 2.15
SNF8-213ENST00000514929 MCF2L2Q86YR7 1114 aa28.51■■■□□ 2.15
SNF8-213ENST00000514929 GNEQ9Y223 722 aaKnown RBP28.51■■■□□ 2.15
SNF8-213ENST00000514929 MYH6P13533 1939 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 B4DLN1 442 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 NEFLP07196 543 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 MRPL12P52815 198 aaKnown RBP28.5■■■□□ 2.15
SNF8-213ENST00000514929 CREB3L3Q68CJ9 461 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 IGDCC4Q8TDY8 1250 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 VTI1AQ96AJ9 217 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 AMNQ9BXJ7 453 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 MAF1Q9H063 256 aa28.5■■■□□ 2.15
SNF8-213ENST00000514929 DYNC1LI2O43237 492 aaPredicted RBP28.49■■■□□ 2.15
SNF8-213ENST00000514929 PRC1O43663 620 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 PQBP1O60828 265 aaKnown RBP28.49■■■□□ 2.15
SNF8-213ENST00000514929 CDC45O75419 566 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 MCM5P33992 734 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 BEX3Q00994 111 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 TROAPQ12815 778 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 NECTIN1Q15223 517 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 TBC1D5Q92609 795 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 PDLIM7Q9NR12 457 aa28.49■■■□□ 2.15
SNF8-213ENST00000514929 ELP1O95163 1332 aa28.48■■■□□ 2.15
SNF8-213ENST00000514929 ZBTB5O15062 677 aa28.48■■■□□ 2.15
SNF8-213ENST00000514929 CTAGE5O15320 804 aa28.48■■■□□ 2.15
SNF8-213ENST00000514929 NKX3-2P78367 333 aa28.48■■■□□ 2.15
SNF8-213ENST00000514929 HOMER1Q86YM7 354 aa28.48■■■□□ 2.15
SNF8-213ENST00000514929 TDHQ8IZJ6 230 aa28.48■■■□□ 2.15
SNF8-213ENST00000514929 FSCN1Q16658 493 aaKnown RBP28.47■■■□□ 2.15
SNF8-213ENST00000514929 MTMR8Q96EF0 704 aa28.47■■■□□ 2.15
SNF8-213ENST00000514929 MTA3Q9BTC8 594 aa28.47■■■□□ 2.15
SNF8-213ENST00000514929 LY9Q9HBG7 655 aa28.47■■■□□ 2.15
SNF8-213ENST00000514929 Q9Y3F1 56 aa28.47■■■□□ 2.15
SNF8-213ENST00000514929 CLTBP09497 229 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 PTGS1P23219 599 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 EDNRBP24530 442 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 DUSP28Q4G0W2 176 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 TMEM63BQ5T3F8 832 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 RNF20Q5VTR2 975 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 SH3RF1Q7Z6J0 888 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 SYTL5Q8TDW5 730 aaPredicted RBP28.46■■■□□ 2.15
SNF8-213ENST00000514929 WDR11Q9BZH6 1224 aa28.46■■■□□ 2.15
SNF8-213ENST00000514929 DCDC2CA8MYV0 355 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 NFXL1Q6ZNB6 911 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 ZNF654Q8IZM8 581 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 TMEM87BQ96K49 555 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 TAAR1Q96RJ0 339 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 PIGSQ96S52 555 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 RIOX1Q9H6W3 641 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 GPHNQ9NQX3 736 aaPredicted RBP28.45■■■□□ 2.14
SNF8-213ENST00000514929 PCDHA1Q9Y5I3 950 aa28.45■■■□□ 2.14
SNF8-213ENST00000514929 RBM47A0AV96 593 aaKnown RBP28.44■■■□□ 2.14
SNF8-213ENST00000514929 TRIM43BA6NCK2 446 aa28.44■■■□□ 2.14
SNF8-213ENST00000514929 ZEB2O60315 1214 aa28.44■■■□□ 2.14
SNF8-213ENST00000514929 PPP1R11O60927 126 aaPredicted RBP28.44■■■□□ 2.14
SNF8-213ENST00000514929 CFBP00751 764 aa28.44■■■□□ 2.14
SNF8-213ENST00000514929 TRAF1Q13077 416 aa28.44■■■□□ 2.14
SNF8-213ENST00000514929 ANKRD33Q7Z3H0 272 aa28.44■■■□□ 2.14
SNF8-213ENST00000514929 NSUN6Q8TEA1 469 aaKnown RBP28.44■■■□□ 2.14
SNF8-213ENST00000514929 TRIM43Q96BQ3 446 aaPredicted RBP28.44■■■□□ 2.14
SNF8-213ENST00000514929 COL20A1Q9P218 1284 aa28.44■■■□□ 2.14
SNF8-213ENST00000514929 MROH7Q68CQ1 1323 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 LTBP2Q14767 1821 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 A0A0U1RQG5 324 aaPredicted RBP28.43■■■□□ 2.14
SNF8-213ENST00000514929 CCDC69A6NI79 296 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 DDAH1O94760 285 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 SLC35G1Q2M3R5 365 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 CXCL17Q6UXB2 119 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 TMTC2Q8N394 836 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 CTCFLQ8NI51 663 aaPredicted RBP28.43■■■□□ 2.14
SNF8-213ENST00000514929 SCFD2Q8WU76 684 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 TOX2Q96NM4 488 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 RMDN3Q96TC7 470 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 MYL10Q9BUA6 226 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 TMEM39AQ9NV64 488 aa28.43■■■□□ 2.14
SNF8-213ENST00000514929 SH2B2O14492 632 aaPredicted RBP28.42■■■□□ 2.14
SNF8-213ENST00000514929 CYTH3O43739 400 aa28.42■■■□□ 2.14
SNF8-213ENST00000514929 CABYRO75952 493 aa28.42■■■□□ 2.14
SNF8-213ENST00000514929 KIF5BP33176 963 aa28.42■■■□□ 2.14
SNF8-213ENST00000514929 PPP2R5BQ15173 497 aa28.42■■■□□ 2.14
SNF8-213ENST00000514929 BADQ92934 168 aa28.42■■■□□ 2.14
SNF8-213ENST00000514929 MAP3K14Q99558 947 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms