RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 BEX3Q00994 111 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 FAAP100Q0VG06 881 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 USH1GQ495M9 461 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 GNASQ5JWF2 1037 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 IQSEC1Q6DN90 963 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 EEPD1Q7L9B9 569 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 Q9Y3F1 56 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 RBM47A0AV96 593 aaKnown RBP12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 E7EWF7 191 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 TRDNQ13061 729 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 FSCN1Q16658 493 aaKnown RBP12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 QRICH1Q2TAL8 776 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 TMEM63BQ5T3F8 832 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 TBX21Q9UL17 535 aa12.21□□□□□ -0.45
HMGXB3-205ENST00000514469 ARVCFO00192 962 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 CABYRO75952 493 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 C9orf50Q5SZB4 431 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 SLC43A3Q8NBI5 491 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 NCOA7Q8NI08 942 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 MTMR8Q96EF0 704 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 MPHOSPH6Q99547 160 aaKnown RBP12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 AP5M1Q9H0R1 490 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 TMEM39AQ9NV64 488 aa12.2□□□□□ -0.46
HMGXB3-205ENST00000514469 PALM3A6NDB9 673 aaPredicted RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 DYNC1LI2O43237 492 aaPredicted RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 DHX16O60231 1041 aaKnown RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 RAG1P15918 1043 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 ANTXR2P58335 489 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 GHRHRQ02643 423 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 PDE4DQ08499 809 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 GRM4Q14833 912 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 SHHQ15465 462 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 CXCL17Q6UXB2 119 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 MCF2L2Q86YR7 1114 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 COL20A1Q9P218 1284 aa12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 RBM8AQ9Y5S9 174 aaKnown RBP12.19□□□□□ -0.46
HMGXB3-205ENST00000514469 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 ERICH2A1L162 156 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 B4DLN1 442 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 OPLAHO14841 1288 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 ZBTB5O15062 677 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 NKRFO15226 690 aaKnown RBP eCLIP12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 ZEB2O60315 1214 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 TIMP1P01033 207 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 CD4P01730 458 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 EPHB4P54760 987 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 FPGSQ05932 587 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 TROAPQ12815 778 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 WTAPQ15007 396 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 SART3Q15020 963 aaKnown RBP12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 SLC35G1Q2M3R5 365 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 Q7L0L9 218 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 CENPQQ7L2Z9 268 aaPredicted RBP12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 DEFB123Q8N688 67 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 SYTL5Q8TDW5 730 aaPredicted RBP12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 AMNQ9BXJ7 453 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 SEZ6LQ9BYH1 1024 aa12.18□□□□□ -0.46
HMGXB3-205ENST00000514469 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 CPT1AP50416 773 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 HSD17B4P51659 736 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 BMP2KLQ5H9B9 411 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 FAM109BQ6ICB4 259 aaPredicted RBP12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 MFSD5Q6N075 450 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 TAAR1Q96RJ0 339 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 VAT1LQ9HCJ6 419 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
HMGXB3-205ENST00000514469 COL6A3P12111 3177 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms