RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
CAST-239ENST00000513666 LMCD1Q9NZU5 365 aa10.77□□□□□ -0.69
CAST-239ENST00000513666 EXOC6BQ9Y2D4 811 aa10.77□□□□□ -0.69
CAST-239ENST00000513666 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
CAST-239ENST00000513666 TNKSO95271 1327 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 TANC1Q9C0D5 1861 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 SOWAHBA6NEL2 793 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 SLFNL1Q499Z3 407 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 IQSEC1Q6DN90 963 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 GJD3Q8N144 294 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 SNX27Q96L92 541 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 MFRPQ9BY79 579 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
CAST-239ENST00000513666 PDGFCQ9NRA1 345 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 HOMER2Q9NSB8 354 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 FEM1BQ9UK73 627 aa10.76□□□□□ -0.69
CAST-239ENST00000513666 FDX1P10109 184 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 HOXB3P14651 431 aaPredicted RBP10.75□□□□□ -0.69
CAST-239ENST00000513666 RASA1P20936 1047 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 NHLH1Q02575 133 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 ZKSCAN2Q63HK3 967 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 SPRED2Q7Z698 418 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 IL1RAPL2Q9NP60 686 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
CAST-239ENST00000513666 SLC4A4Q9Y6R1 1079 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 PTPRSQ13332 1948 aa10.75□□□□□ -0.69
CAST-239ENST00000513666 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.74□□□□□ -0.69
CAST-239ENST00000513666 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 BAIAP3O94812 1187 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 ALADP13716 330 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 LEXMQ3ZCV2 418 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 TMEM63BQ5T3F8 832 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 CEP85Q6P2H3 762 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 FBXO16Q8IX29 292 aaPredicted RBP10.74□□□□□ -0.69
CAST-239ENST00000513666 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.74□□□□□ -0.694e-10■□□□□ 8.7
CAST-239ENST00000513666 KCNH6Q9H252 994 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 UBE2ZQ9H832 354 aaPredicted RBP10.74□□□□□ -0.69
CAST-239ENST00000513666 RNF146Q9NTX7 359 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 POLR3EQ9NVU0 708 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 PAG1Q9NWQ8 432 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 SYNPO2Q9UMS6 1093 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 DDX49Q9Y6V7 483 aaKnown RBP10.74□□□□□ -0.69
CAST-239ENST00000513666 MYH7P12883 1935 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 TET1Q8NFU7 2136 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 SCN10AQ9Y5Y9 1956 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 IQCF3P0C7M6 154 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 PURAQ00577 322 aaKnown RBP10.74□□□□□ -0.69
CAST-239ENST00000513666 UBE3CQ15386 1083 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 TKFCQ3LXA3 575 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 EEPD1Q7L9B9 569 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
CAST-239ENST00000513666 GMCL1P1Q8NEA9 526 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 RHPN1Q8TCX5 695 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 GDPD5Q8WTR4 605 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 MKL1Q969V6 931 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 UIMC1Q96RL1 719 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 FTOQ9C0B1 505 aaKnown RBP eCLIP10.74□□□□□ -0.69
CAST-239ENST00000513666 VTA1Q9NP79 307 aa10.74□□□□□ -0.69
CAST-239ENST00000513666 LCTP09848 1927 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 LCHNA4D1U4 455 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
CAST-239ENST00000513666 SSTR3P32745 418 aaPredicted RBP10.73□□□□□ -0.69
CAST-239ENST00000513666 KCNJ6P48051 423 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 DUSP28Q4G0W2 176 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 CLASRPQ8N2M8 674 aaKnown RBP10.73□□□□□ -0.69
CAST-239ENST00000513666 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.73□□□□□ -0.69
CAST-239ENST00000513666 MKNK2Q9HBH9 465 aa10.73□□□□□ -0.69
CAST-239ENST00000513666 ZNF536O15090 1300 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 TMEM232C9JQI7 657 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 CHGBP05060 677 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 MYL3P08590 195 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 IFIT2P09913 472 aaKnown RBP10.72□□□□□ -0.69
CAST-239ENST00000513666 BMP3P12645 472 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 CPT1AP50416 773 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 BFSP2Q13515 415 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 ITPRIPQ8IWB1 547 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 MORC4Q8TE76 937 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 FBXL18Q96ME1 805 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 MTG1Q9BT17 334 aaPredicted RBP10.72□□□□□ -0.69
CAST-239ENST00000513666 CYP39A1Q9NYL5 469 aa10.72□□□□□ -0.69
CAST-239ENST00000513666 SIP14410 1827 aa10.71□□□□□ -0.69
CAST-239ENST00000513666 ALAS1P13196 640 aa10.71□□□□□ -0.69
CAST-239ENST00000513666 IL9P15248 144 aa10.71□□□□□ -0.69
CAST-239ENST00000513666 KCNA5P22460 613 aa10.71□□□□□ -0.69
CAST-239ENST00000513666 STAT2P52630 851 aa10.71□□□□□ -0.69
CAST-239ENST00000513666 WDR5P61964 334 aaKnown RBP10.71□□□□□ -0.69
CAST-239ENST00000513666 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
CAST-239ENST00000513666 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms