RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 BARHL2Q9NY43 387 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 KCPQ6ZWJ8 1503 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
CTNND2-215ENST00000513588 MFSD14BQ5SR56 506 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 FBXO33Q7Z6M2 555 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 LRRC47Q8N1G4 583 aaKnown RBP12.74□□□□□ -0.37
CTNND2-215ENST00000513588 CCSER1Q9C0I3 900 aa12.74□□□□□ -0.37
CTNND2-215ENST00000513588 BUB1O43683 1085 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 HLA-DOAP06340 250 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 CXCR5P32302 372 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 CDR1P51861 262 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 LRRC41Q15345 812 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 BEND6Q5SZJ8 279 aaPredicted RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 MED15Q96RN5 788 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 CEP89Q96ST8 783 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 HYOU1Q9Y4L1 999 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 ABCC6O95255 1503 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 FCER1AP12319 257 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 TCP1P17987 556 aaKnown RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 SBK1Q52WX2 424 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 MYOCDQ8IZQ8 938 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 GPR101Q96P66 508 aaPredicted RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 NDST4Q9H3R1 872 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 EBAG9O00559 213 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 EIF4A3P38919 411 aaKnown RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 TRAPPC3LQ5T215 181 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 HNRNPLLQ8WVV9 542 aaKnown RBP12.73□□□□□ -0.37
CTNND2-215ENST00000513588 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 FAM107BQ9H098 131 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 ANKZF1Q9H8Y5 726 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 GGA1Q9UJY5 639 aa12.73□□□□□ -0.37
CTNND2-215ENST00000513588 FAM205AQ6ZU69 1335 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 RHOBTB3O94955 611 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 USP14P54578 494 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 MAN2A1Q16706 1144 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 CFAP58Q5T655 872 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 HPS3Q969F9 1004 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 COA7Q96BR5 231 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 JRKLQ9Y4A0 524 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 PPP1R12BO60237 982 aaPredicted RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 MOCS3O95396 460 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 CDK8P49336 464 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 KIF11P52732 1056 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 FUT2Q10981 343 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 STK4Q13043 487 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 E2F4Q16254 413 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 SFMBT2Q5VUG0 894 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 KRT26Q7Z3Y9 468 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 GIMAP8Q8ND71 665 aaPredicted RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 ZEB2O60315 1214 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 MRPS25P82663 173 aaKnown RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 RASSF7Q02833 373 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 CFAP221Q4G0U5 840 aa12.72□□□□□ -0.37
CTNND2-215ENST00000513588 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 FNBP4Q8N3X1 1017 aaPredicted RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTNND2-215ENST00000513588 H3BQF6 201 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 SRGNP10124 158 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 MSANTD4Q8NCY6 345 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.37
CTNND2-215ENST00000513588 L1RE1Q9UN81 338 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 LEMD3Q9Y2U8 911 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 EVX2Q03828 476 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 VWA3BQ502W6 1294 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 ERMNQ8TAM6 284 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.37
CTNND2-215ENST00000513588 BCCIPQ9P287 314 aaKnown RBP eCLIP12.71□□□□□ -0.37
CTNND2-215ENST00000513588 PCDHA12Q9UN75 941 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 RRP15Q9Y3B9 282 aaKnown RBP12.71□□□□□ -0.37
CTNND2-215ENST00000513588 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.37
CTNND2-215ENST00000513588 LRRC10BA6NIK2 292 aa12.71□□□□□ -0.38
CTNND2-215ENST00000513588 EIF3CLB5ME19 914 aaKnown RBP12.71□□□□□ -0.38
CTNND2-215ENST00000513588 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.38
CTNND2-215ENST00000513588 EIF3CQ99613 913 aaKnown RBP12.71□□□□□ -0.38
CTNND2-215ENST00000513588 LSM14BQ9BX40 385 aaKnown RBP12.71□□□□□ -0.38
CTNND2-215ENST00000513588 STK17AQ9UEE5 414 aa12.71□□□□□ -0.38
CTNND2-215ENST00000513588 ANO9A1A5B4 782 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 CETN3O15182 167 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 TBCAO75347 108 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 ERLIN2O94905 339 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 KLK7P49862 253 aa12.7□□□□□ -0.38
CTNND2-215ENST00000513588 PMS1P54277 932 aaKnown RBP12.7□□□□□ -0.38
CTNND2-215ENST00000513588 POLR2FP61218 127 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms