RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 SYNRGQ9UMZ2 1314 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 COL6A3P12111 3177 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 PGK1P00558 417 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 ICAM1P05362 532 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 CST5P28325 142 aaPredicted RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 ACVR2BQ13705 512 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 CCDC96Q2M329 555 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 ARMCX2Q7L311 632 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 KLHDC9Q8NEP7 349 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 TRERF1Q96PN7 1200 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 DSCC1Q9BVC3 393 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 KATNBL1Q9H079 304 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 DIAPH3Q9NSV4 1193 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 PRKAG2Q9UGJ0 569 aa11.55□□□□□ -0.56
CCL28-203ENST00000513525 ZHX1Q9UKY1 873 aaPredicted RBP11.55□□□□□ -0.56
CCL28-203ENST00000513525 MYH7BA7E2Y1 1941 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 A0A1W2PQ45 241 aaPredicted RBP11.54□□□□□ -0.56
CCL28-203ENST00000513525 A0A1W2PQY0 241 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 MOXD2PA6NHM9 499 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 ZNF213O14771 459 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 SNHG28P0DPA3 235 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 PDHBP11177 359 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 ALAS1P13196 640 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 CNTN2Q02246 1040 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 TRIM60Q495X7 471 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 SYDE2Q5VT97 1194 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 CCSAPQ6IQ19 270 aaPredicted RBP11.54□□□□□ -0.56
CCL28-203ENST00000513525 CCDC144CPQ8IYA2 1237 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 ESR2Q92731 530 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 FERMT2Q96AC1 680 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 LENG1Q96BZ8 264 aaPredicted RBP11.54□□□□□ -0.56
CCL28-203ENST00000513525 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 LBHD1Q9BQE6 289 aaPredicted RBP11.54□□□□□ -0.56
CCL28-203ENST00000513525 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
CCL28-203ENST00000513525 UPF3AQ9H1J1 476 aaKnown RBP11.54□□□□□ -0.56
CCL28-203ENST00000513525 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 NEDD4P46934 1319 aa11.54□□□□□ -0.56
CCL28-203ENST00000513525 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 ASB14A6NK59 587 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 ADCY6O43306 1168 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 NKX3-2P78367 333 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 ZNF543Q08ER8 600 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 CCDC178Q5BJE1 867 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 MUM1L1Q5H9M0 696 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 SNX21Q969T3 373 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 CHMP4CQ96CF2 233 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 CYP39A1Q9NYL5 469 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 PNMA2Q9UL42 364 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 CCPG1Q9ULG6 757 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 MTMR7Q9Y216 660 aa11.53□□□□□ -0.56
CCL28-203ENST00000513525 LOC102724159A0A0B4J2E5 919 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 REC8O95072 547 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 SLC16A2P36021 539 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 ACLYP53396 1101 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 GJA9P57773 515 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 SNAP25P60880 206 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 PWP2Q15269 919 aaKnown RBP11.52□□□□□ -0.57
CCL28-203ENST00000513525 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 DGKHQ86XP1 1220 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 NUP133Q8WUM0 1156 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 ASTN1O14525 1302 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 GBF1Q92538 1859 aa11.52□□□□□ -0.57
CCL28-203ENST00000513525 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
CCL28-203ENST00000513525 ELP1O95163 1332 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 TLE2Q04725 743 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 KCNA10Q16322 511 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
CCL28-203ENST00000513525 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
CCL28-203ENST00000513525 FRMPD2Q68DX3 1309 aaPredicted RBP11.51□□□□□ -0.57
CCL28-203ENST00000513525 ANKRD33Q7Z3H0 272 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 IQCA1Q86XH1 822 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 PCSK9Q8NBP7 692 aaKnown RBP11.51□□□□□ -0.57
CCL28-203ENST00000513525 WDR19Q8NEZ3 1342 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 RAD50Q92878 1312 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 SPC25Q9HBM1 224 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 STARD7Q9NQZ5 370 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 CTNNA3Q9UI47 895 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 SCN10AQ9Y5Y9 1956 aa11.51□□□□□ -0.57
CCL28-203ENST00000513525 MYADML2A6NDP7 307 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 KDM4AO75164 1064 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 CLTBP09497 229 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 C6orf222P0C671 652 aaPredicted RBP11.5□□□□□ -0.57
CCL28-203ENST00000513525 PTPN5P54829 565 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 FOXK1P85037 733 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 NSMFQ6X4W1 530 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 SH3RF1Q7Z6J0 888 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 HSCBQ8IWL3 235 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 PRDM5Q9NQX1 630 aaPredicted RBP11.5□□□□□ -0.57
CCL28-203ENST00000513525 MROH7Q68CQ1 1323 aa11.5□□□□□ -0.57
CCL28-203ENST00000513525 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms