RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 IKQ13123 557 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 DUSP28Q4G0W2 176 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 CLASRPQ8N2M8 674 aaKnown RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 CHMP4CQ96CF2 233 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 TRERF1Q96PN7 1200 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 BOLA2Q9H3K6 86 aa12.53□□□□□ -0.4
CLDND1-227ENST00000513452 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-227ENST00000513452 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
CLDND1-227ENST00000513452 MYH4Q9Y623 1939 aa12.52□□□□□ -0.4
CLDND1-227ENST00000513452 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 DCXO43602 365 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 PRDM1O75626 825 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 FDX1P10109 184 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 BMP3P12645 472 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 CPT1AP50416 773 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 STAT2P52630 851 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 DEFB103AP81534 67 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 BFSP2Q13515 415 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 UBE3CQ15386 1083 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 TKFCQ3LXA3 575 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 HSP90AB4PQ58FF6 505 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 SLFN13Q68D06 897 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 GMCL1P1Q8NEA9 526 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
CLDND1-227ENST00000513452 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 PUS7LQ9H0K6 701 aaKnown RBP12.52□□□□□ -0.41
CLDND1-227ENST00000513452 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 CYP39A1Q9NYL5 469 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
CLDND1-227ENST00000513452 TTLL1O95922 423 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 RLBP1P12271 317 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 CHMP4BP1P59074 171 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 SNAP25P60880 206 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 SBK1Q52WX2 424 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
CLDND1-227ENST00000513452 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 TGS1Q96RS0 853 aaKnown RBP12.51□□□□□ -0.41
CLDND1-227ENST00000513452 KCNH6Q9H252 994 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
CLDND1-227ENST00000513452 LCTP09848 1927 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 H3BQ06 376 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-227ENST00000513452 ERVK-21P61565 698 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 MORC4Q8TE76 937 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 MKL1Q969V6 931 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 CRBNQ96SW2 442 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
CLDND1-227ENST00000513452 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 MYH7P12883 1935 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 RAD50Q92878 1312 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 ATP5JP18859 108 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 PTGISQ16647 500 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
CLDND1-227ENST00000513452 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-227ENST00000513452 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 HFE2Q6ZVN8 426 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-227ENST00000513452 CCDC155Q8N6L0 562 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 CHURC1Q8WUH1 139 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
CLDND1-227ENST00000513452 HAUS7Q99871 368 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
CLDND1-227ENST00000513452 SIP14410 1827 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 PLIN4Q96Q06 1357 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 RBAK-RBAKDNI3L0D1 243 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 GJB5O95377 273 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 SLC1A4P43007 532 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 ALDH5A1P51649 535 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-227ENST00000513452 PTPN11Q06124 597 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-227ENST00000513452 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
CLDND1-227ENST00000513452 ZSCAN25Q6NSZ9 544 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 CNKSR3Q6P9H4 555 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 LRRC8DQ7L1W4 858 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 AFAP1L1Q8TED9 768 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 PHOX2BQ99453 314 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 RAD9AQ99638 391 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
CLDND1-227ENST00000513452 ADD3Q9UEY8 706 aaKnown RBP12.48□□□□□ -0.41
CLDND1-227ENST00000513452 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
CLDND1-227ENST00000513452 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms