RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 MYL3P08590 195 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 SNAP25P60880 206 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 SBK1Q52WX2 424 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 HFE2Q6ZVN8 426 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 CEP95Q96GE4 821 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 MTG1Q9BT17 334 aaPredicted RBP13.39□□□□□ -0.27
RNF4-218ENST00000513284 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 PAG1Q9NWQ8 432 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 MTMR4Q9NYA4 1195 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 MTUS1Q9ULD2 1270 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 ZNF318Q5VUA4 2279 aa13.39□□□□□ -0.27
RNF4-218ENST00000513284 SCN10AQ9Y5Y9 1956 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 RBM47A0AV96 593 aaKnown RBP13.38□□□□□ -0.27
RNF4-218ENST00000513284 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 GSG1L2A8MUP6 293 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 DCXO43602 365 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 BMP3P12645 472 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 UBE3CQ15386 1083 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 ERC1Q8IUD2 1116 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 RPAP2Q8IXW5 612 aaPredicted RBP13.38□□□□□ -0.27
RNF4-218ENST00000513284 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
RNF4-218ENST00000513284 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
RNF4-218ENST00000513284 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 LCTP09848 1927 aa13.38□□□□□ -0.27
RNF4-218ENST00000513284 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
RNF4-218ENST00000513284 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
RNF4-218ENST00000513284 GJB5O95377 273 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 FDX1P10109 184 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 ALAS1P13196 640 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 FAM47CQ5HY64 1035 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 TGS1Q96RS0 853 aaKnown RBP13.37□□□□□ -0.27
RNF4-218ENST00000513284 RAD9AQ99638 391 aa13.37□□□□□ -0.27
RNF4-218ENST00000513284 MINDY4BA8MYZ0 360 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 NBNO60934 754 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 PRDM1O75626 825 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 ATP5JP18859 108 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 ZP2Q05996 745 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 STAG1Q8WVM7 1258 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 DHX38Q92620 1227 aaKnown RBP13.36□□□□□ -0.27
RNF4-218ENST00000513284 COPS5Q92905 334 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 HAUS7Q99871 368 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 C17orf80Q9BSJ5 609 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
RNF4-218ENST00000513284 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
RNF4-218ENST00000513284 A6NJR5 290 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 TTLL1O95922 423 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 CXCL10P02778 98 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 KCNJ6P48051 423 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 CPT1AP50416 773 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
RNF4-218ENST00000513284 BFSP2Q13515 415 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
RNF4-218ENST00000513284 COL19A1Q14993 1142 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 IER5LQ5T953 404 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 PRSS33Q8NF86 280 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 DDRGK1Q96HY6 314 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 TANC1Q9C0D5 1861 aa13.35□□□□□ -0.27
RNF4-218ENST00000513284 PLA2G6O60733 806 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 MCCP23508 829 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 IRS1P35568 1242 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 ALDH5A1P51649 535 aaPredicted RBP13.34□□□□□ -0.27
RNF4-218ENST00000513284 STAT2P52630 851 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
RNF4-218ENST00000513284 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
RNF4-218ENST00000513284 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
RNF4-218ENST00000513284 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
RNF4-218ENST00000513284 OR6J1Q8NGC5 347 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 CHURC1Q8WUH1 139 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 GMCL1Q96IK5 515 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 EPB41L4AQ9HCS5 686 aaPredicted RBP13.34□□□□□ -0.27
RNF4-218ENST00000513284 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
RNF4-218ENST00000513284 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
RNF4-218ENST00000513284 LTBRP36941 435 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
RNF4-218ENST00000513284 PTGISQ16647 500 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 PUS10Q3MIT2 529 aaKnown RBP13.33□□□□□ -0.28
RNF4-218ENST00000513284 FAM117BQ6P1L5 589 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF4-218ENST00000513284 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms