RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 PBRM1Q86U86 1689 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 A0A0G2JLL6 359 aaPredicted RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 H0Y8X5 98 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 FOXD2O60548 495 aaPredicted RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 VAV1P15498 845 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 BMP7P18075 431 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 CYP4F3Q08477 520 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 TCEAL1Q15170 157 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 CWF19L1Q69YN2 538 aaKnown RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 HEATR6Q6AI08 1181 aaKnown RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 FIBCD1Q8N539 461 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 MARCH10Q8NA82 808 aaPredicted RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 ST13P5Q8NFI4 369 aaPredicted RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 HHIPL1Q96JK4 782 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 DNAJC2Q99543 621 aaKnown RBP5.72□□□□□ -1.49
NUP54-212ENST00000513248 CDADC1Q9BWV3 514 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 ST7Q9NRC1 585 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 JAG2Q9Y219 1238 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 EMC9Q9Y3B6 208 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 BIVM-ERCC5R4GMW8 1640 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 FHAD1B1AJZ9 1412 aa5.72□□□□□ -1.49
NUP54-212ENST00000513248 ABCA5Q8WWZ7 1642 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 DDAH1O94760 285 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 SYN1P17600 705 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 KIR2DL1P43626 348 aaPredicted RBP5.71□□□□□ -1.5
NUP54-212ENST00000513248 KIR2DL2P43627 348 aaPredicted RBP5.71□□□□□ -1.5
NUP54-212ENST00000513248 RASGRF1Q13972 1273 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 RTP2Q5QGT7 225 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 TMEM132EQ6IEE7 984 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 JMYQ8N9B5 988 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 SHISA4Q96DD7 197 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 FGD4Q96M96 766 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 MCMBPQ9BTE3 642 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 SLC12A9Q9BXP2 914 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 LNPKQ9C0E8 428 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 NOL6Q9H6R4 1146 aaKnown RBP5.71□□□□□ -1.5
NUP54-212ENST00000513248 ERVK13-1Q9NX77 482 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 CGGBP1Q9UFW8 167 aaPredicted RBP5.71□□□□□ -1.5
NUP54-212ENST00000513248 GPR160Q9UJ42 338 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 KCTD3Q9Y597 815 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 KIF27Q86VH2 1401 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 GRIN2AQ12879 1464 aa5.71□□□□□ -1.5
NUP54-212ENST00000513248 FAM221BA6H8Z2 402 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 PDE6BP35913 854 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 GRB10Q13322 594 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 NFIXQ14938 502 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 SLC14A2Q15849 920 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 DBX2Q6ZNG2 339 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 CEP128Q6ZU80 1094 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 EEPD1Q7L9B9 569 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 BVESQ8NE79 360 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 ADCY4Q8NFM4 1077 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 ZDHHC15Q96MV8 337 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 APBA2Q99767 749 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 AP5S1Q9NUS5 200 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 TNFRSF10DQ9UBN6 386 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 GPR55Q9Y2T6 319 aaPredicted RBP5.7□□□□□ -1.5
NUP54-212ENST00000513248 SF3B6Q9Y3B4 125 aaKnown RBP5.7□□□□□ -1.5
NUP54-212ENST00000513248 TTBK1Q5TCY1 1321 aaPredicted RBP5.7□□□□□ -1.5
NUP54-212ENST00000513248 ARAP1Q96P48 1450 aa5.7□□□□□ -1.5
NUP54-212ENST00000513248 ERICH3Q5RHP9 1530 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 CLASP1Q7Z460 1538 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 ADAMTS12P58397 1594 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 NOTOA8MTQ0 251 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 FADS2P1A8MWK0 482 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 PDPK1O15530 556 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 NRDCO43847 1150 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 PSPNO60542 156 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 TRIM13O60858 407 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 PPM1BO75688 479 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 CD3EP07766 207 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 GSTM1P09488 218 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 RANGAP1P46060 587 aaPredicted RBP5.69□□□□□ -1.5
NUP54-212ENST00000513248 PPP2R5DQ14738 602 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 NLRX1Q86UT6 975 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 TRIM59Q8IWR1 403 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 CXorf38Q8TB03 319 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 SGSM3Q96HU1 749 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 TRIM55Q9BYV6 548 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 OSBPL2Q9H1P3 480 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 SNTG2Q9NY99 539 aa5.69□□□□□ -1.5
NUP54-212ENST00000513248 R3HCC1Q9Y3T6 440 aaKnown RBP5.69□□□□□ -1.5
NUP54-212ENST00000513248 A0A1W2PQU0 124 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 OR14I1A6ND48 311 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 EFEMP2O95967 443 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 ITGAVP06756 1048 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 NAT2P11245 290 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 NOP2P46087 812 aaKnown RBP5.68□□□□□ -1.5
NUP54-212ENST00000513248 GALK1P51570 392 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 RTP1P59025 263 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 POU4F1Q01851 419 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
NUP54-212ENST00000513248 ZNF227Q86WZ6 799 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 NAT16Q8N8M0 369 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 TMEM52Q8NDY8 209 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 SIGLEC10Q96LC7 697 aa5.68□□□□□ -1.5
NUP54-212ENST00000513248 FCRL3Q96P31 734 aaPredicted RBP5.68□□□□□ -1.5
NUP54-212ENST00000513248 DEPDC7Q96QD5 511 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms