RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	NSUN7	Q8NE18	718 aa	Known RBP	10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	CLEC4D	Q8WXI8	215 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	LARP6	Q9BRS8	491 aa	Known RBP	10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	TINF2	Q9BSI4	451 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	MYL10	Q9BUA6	226 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	AMN	Q9BXJ7	453 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.13	□□□□□ -0.79	8e-7	■■□□□ 14.5
ACSF2-223	ENST00000513101	CYP39A1	Q9NYL5	469 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	SMC3	Q9UQE7	1217 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	ZDHHC9	Q9Y397	364 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	MRPL11	Q9Y3B7	192 aa	Known RBP	10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	MGAM	O43451	1857 aa		10.13	□□□□□ -0.79
ACSF2-223	ENST00000513101	PARP14	Q460N5	1801 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	ABCB11	O95342	1321 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	SYNGAP1	Q96PV0	1343 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	KLF18	A0A0U1RQI7	1052 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	NFIB	O00712	420 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	ZBTB43	O43298	467 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	MSC	O60682	206 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	MYC	P01106	439 aa	Predicted RBP	10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	ATXN8OS	P0DMR3	200 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	CYP2C19	P33261	490 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	CNTN2	Q02246	1040 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	NSMF	Q6X4W1	530 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	MCF2L2	Q86YR7	1114 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	SRBD1	Q8N5C6	995 aa	Known RBP	10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	SAMD3	Q8N6K7	520 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	SPRYD3	Q8NCJ5	442 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	U2AF1L4	Q8WU68	220 aa	Known RBP	10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	FGD4	Q96M96	766 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	PIGS	Q96S52	555 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	CRISPLD2	Q9H0B8	497 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	RBM28	Q9NW13	759 aa	Known RBP	10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	DOCK3	Q8IZD9	2030 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	ZNF236	Q9UL36	1845 aa		10.12	□□□□□ -0.79
ACSF2-223	ENST00000513101	STK36	Q9NRP7	1315 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	CCDC196	A0A1B0GTZ2	297 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	ASB14	A6NK59	587 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	CYBA	P13498	195 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	EN2	P19622	333 aa	Predicted RBP	10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	SYT1	P21579	422 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	GJB2	P29033	226 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	GHRHR	Q02643	423 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	BAAT	Q14032	418 aa	Predicted RBP	10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	NTRK3	Q16288	839 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	USH1G	Q495M9	461 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	TMTC3	Q6ZXV5	915 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	MICU3	Q86XE3	530 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	TNPO1	Q92973	898 aa	Known RBP	10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	RRP36	Q96EU6	259 aa	Known RBP	10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	DEFB118	Q96PH6	123 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	MAP3K20	Q9NYL2	800 aa	Known RBP	10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	ADD3	Q9UEY8	706 aa	Known RBP	10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	KIF3A	Q9Y496	699 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	PCDHA1	Q9Y5I3	950 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	PLXNB2	O15031	1838 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	CENPF	P49454	3210 aa		10.11	□□□□□ -0.79
ACSF2-223	ENST00000513101	PTPDC1	A2A3K4	754 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	SOWAHB	A6NEL2	793 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	GOLGA8A	A7E2F4	631 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	GOLGA8B	A8MQT2	603 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	SEPT4	O43236	478 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	STX6	O43752	255 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	PPP1R11	O60927	126 aa	Predicted RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	CDKL5	O76039	1030 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	PLEKHA8P1	O95397	391 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	SNAI1	O95863	264 aa	Predicted RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	TFRC	P02786	760 aa	Known RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	IFNAR1	P17181	557 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	TAL1	P17542	331 aa	Predicted RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	RXRA	P19793	462 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	CCND3	P30281	292 aa	Predicted RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	RPS6	P62753	249 aa	Known RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	PKP1	Q13835	747 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	RTN1	Q16799	776 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	LHX8	Q68G74	356 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	RNF207	Q6ZRF8	634 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	HOMER1	Q86YM7	354 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	ANKLE1	Q8NAG6	615 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	TRPV1	Q8NER1	839 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	DNER	Q8NFT8	737 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	MORC4	Q8TE76	937 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	SHISA4	Q96DD7	197 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	ABHD16B	Q9H3Z7	469 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	DDX20	Q9UHI6	824 aa	Known RBP	10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	OGDHL	Q9ULD0	1010 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101	CNPY2	Q9Y2B0	182 aa		10.1	□□□□□ -0.79
ACSF2-223	ENST00000513101		B4DLN1	442 aa		10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	ZSCAN22	P10073	491 aa	Predicted RBP	10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	FDPS	P14324	419 aa	Known RBP	10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	CNGA1	P29973	690 aa		10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	METAP2	P50579	478 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	MRPL12	P52815	198 aa	Known RBP	10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	FUT2	Q10981	343 aa		10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	ACVR2B	Q13705	512 aa		10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	NFKBIB	Q15653	356 aa		10.09	□□□□□ -0.79
ACSF2-223	ENST00000513101	PRAMEF19	Q5SWL8	479 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms