RNA–Protein interactions for RNA: ENST00000512673.1

ALYREF-204, Transcript of Aly/REF export factor, humanhuman

TSL 2

Gene ALYREF, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-204ENST00000512673 C12orf60Q5U649 245 aa18.69■□□□□ 0.58
ALYREF-204ENST00000512673 IQSEC1Q6DN90 963 aa18.69■□□□□ 0.58
ALYREF-204ENST00000512673 C16orf86Q6ZW13 317 aa18.69■□□□□ 0.58
ALYREF-204ENST00000512673 MRPL38Q96DV4 380 aaKnown RBP18.69■□□□□ 0.58
ALYREF-204ENST00000512673 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
ALYREF-204ENST00000512673 CLDND1Q9NY35 253 aa18.69■□□□□ 0.58
ALYREF-204ENST00000512673 COG6Q9Y2V7 657 aa18.69■□□□□ 0.58
ALYREF-204ENST00000512673 RIF1Q5UIP0 2472 aaKnown RBP18.68■□□□□ 0.58
ALYREF-204ENST00000512673 SCN10AQ9Y5Y9 1956 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 BFSP2Q13515 415 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 BANK1Q8NDB2 785 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 PABPC5Q96DU9 382 aaKnown RBP18.68■□□□□ 0.58
ALYREF-204ENST00000512673 MTG1Q9BT17 334 aaPredicted RBP18.68■□□□□ 0.58
ALYREF-204ENST00000512673 ACAD9Q9H845 621 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 RNF146Q9NTX7 359 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 NOD1Q9Y239 953 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 FAM50BQ9Y247 325 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 KMT2EQ8IZD2 1858 aa18.68■□□□□ 0.58
ALYREF-204ENST00000512673 TMEM221A6NGB7 291 aa18.67■□□□□ 0.58
ALYREF-204ENST00000512673 M0R296 226 aa18.67■□□□□ 0.58
ALYREF-204ENST00000512673 POLA2Q14181 598 aa18.67■□□□□ 0.58
ALYREF-204ENST00000512673 EDAQ92838 391 aa18.67■□□□□ 0.58
ALYREF-204ENST00000512673 ALG13Q9NP73 1137 aaKnown RBP18.67■□□□□ 0.58
ALYREF-204ENST00000512673 GPHNQ9NQX3 736 aaPredicted RBP18.67■□□□□ 0.58
ALYREF-204ENST00000512673 Q9Y3F1 56 aa18.67■□□□□ 0.58
ALYREF-204ENST00000512673 DMDP11532 3685 aa18.66■□□□□ 0.58
ALYREF-204ENST00000512673 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
ALYREF-204ENST00000512673 MBD4O95243 580 aa18.66■□□□□ 0.58
ALYREF-204ENST00000512673 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
ALYREF-204ENST00000512673 ATOH1Q92858 354 aaPredicted RBP18.66■□□□□ 0.58
ALYREF-204ENST00000512673 PLXNA3P51805 1871 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 LCTP09848 1927 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 GREB1LQ9C091 1923 aaPredicted RBP18.65■□□□□ 0.58
ALYREF-204ENST00000512673 CACNA1BQ00975 2339 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 CHGBP05060 677 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 LTBRP36941 435 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 VCPP55072 806 aaKnown RBP18.65■□□□□ 0.58
ALYREF-204ENST00000512673 DLX2Q07687 328 aaPredicted RBP18.65■□□□□ 0.58
ALYREF-204ENST00000512673 DUSP28Q4G0W2 176 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 TIGD5Q53EQ6 642 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 CNKSR3Q6P9H4 555 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 TRIM67Q6ZTA4 783 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 OR6J1Q8NGC5 347 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
ALYREF-204ENST00000512673 ISY1Q9ULR0 285 aaKnown RBP18.65■□□□□ 0.58
ALYREF-204ENST00000512673 COL4A6Q14031 1691 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 NBNO60934 754 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 RGS20O76081 388 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 ALAS1P13196 640 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 SNAP25P60880 206 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 PTGISQ16647 500 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 PTPROQ16827 1216 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.64■□□□□ 0.57
ALYREF-204ENST00000512673 BMP8AQ7Z5Y6 402 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
ALYREF-204ENST00000512673 FAM186AA6NE01 2351 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 MYH4Q9Y623 1939 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 GOLIM4O00461 696 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 CPT1AP50416 773 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 OAZ1P54368 228 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 SMAD2Q15796 467 aaKnown RBP18.63■□□□□ 0.57
ALYREF-204ENST00000512673 EPC2Q52LR7 807 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 MUM1L1Q5H9M0 696 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 TMED8Q6PL24 325 aaPredicted RBP18.63■□□□□ 0.57
ALYREF-204ENST00000512673 LRRC8DQ7L1W4 858 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 ASCL5Q7RTU5 278 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
ALYREF-204ENST00000512673 SSH3Q8TE77 659 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 COPS5Q92905 334 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 CTAGE1Q96RT6 745 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
ALYREF-204ENST00000512673 VTA1Q9NP79 307 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 ATP8A2Q9NTI2 1148 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
ALYREF-204ENST00000512673 H0Y858 1186 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 MBTPS2O43462 519 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 CSPG5O95196 566 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 SELPP16109 830 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 GPM6BQ13491 265 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
ALYREF-204ENST00000512673 AACSQ86V21 672 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 FBXL6Q8N531 539 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 AFAP1L1Q8TED9 768 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 DHX38Q92620 1227 aaKnown RBP18.62■□□□□ 0.57
ALYREF-204ENST00000512673 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 PRRX2Q99811 253 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 NSUN3Q9H649 340 aaKnown RBP18.62■□□□□ 0.57
ALYREF-204ENST00000512673 TLR9Q9NR96 1032 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 NYAP2Q9P242 653 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
ALYREF-204ENST00000512673 RASA1P20936 1047 aa18.61■□□□□ 0.57
ALYREF-204ENST00000512673 COL19A1Q14993 1142 aa18.61■□□□□ 0.57
ALYREF-204ENST00000512673 GDF6Q6KF10 455 aaPredicted RBP18.61■□□□□ 0.57
ALYREF-204ENST00000512673 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms