RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 PDE4DQ08499 809 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 CENPPQ6IPU0 288 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 POTEHQ6S545 545 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 NAPGQ99747 312 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-210ENST00000512332 TUBGCP2Q9BSJ2 902 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 TTYH3Q9C0H2 523 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 COA1Q9GZY4 146 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 ARFGAP3Q9NP61 516 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 SWAP70Q9UH65 585 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 RAB21Q9UL25 225 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 MTMR7Q9Y216 660 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 DAGLAQ9Y4D2 1042 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 UBR3Q6ZT12 1888 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 ABCB11O95342 1321 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 LTBP1Q14766 1721 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 MYH8P13535 1937 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 A0A1W2PQJ5 194 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 TECP42680 631 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 KRT83P78385 493 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 STK4Q13043 487 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 KIF4BQ2VIQ3 1234 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 TEX35Q5T0J7 233 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 PPP4R3AQ6IN85 833 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 SV2BQ7L1I2 683 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 CCDC170Q8IYT3 715 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 SLC35F6Q8N357 371 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 MSANTD4Q8NCY6 345 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 ATRIPQ8WXE1 791 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 ERGIC2Q96RQ1 377 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 CHP1Q99653 195 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 RAB34Q9BZG1 259 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 LRRC27Q9C0I9 530 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
CPNE4-210ENST00000512332 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 PSMD14O00487 310 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 TBC1D8O95759 1140 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 ADCY7P51828 1080 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 ASIC1P78348 528 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 ZBED6P86452 979 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 ANKRD40Q6AI12 368 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 WDR59Q6PJI9 974 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 MSL3Q8N5Y2 521 aaKnown RBP10.33□□□□□ -0.76
CPNE4-210ENST00000512332 PLIN2Q99541 437 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 SLF1Q9BQI6 1058 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 BIN2Q9UBW5 565 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-210ENST00000512332 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
CPNE4-210ENST00000512332 PNMA6FA0A0J9YX94 578 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 TTLL1O95922 423 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 AMPD2Q01433 879 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 GRB10Q13322 594 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 CALCRLQ16602 461 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 TMEM266Q2M3C6 531 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 UNC13DQ70J99 1090 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 UBA5Q9GZZ9 404 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 VAT1LQ9HCJ6 419 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 RIC8AQ9NPQ8 531 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 BLOC1S4Q9NUP1 217 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 LRWD1Q9UFC0 647 aa10.33□□□□□ -0.76
CPNE4-210ENST00000512332 RASSF10A6NK89 507 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 B4DLN1 442 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 UBAP1LF5GYI3 381 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 C6orf229H3BNL8 230 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 POLRMTO00411 1230 aaKnown RBP10.32□□□□□ -0.76
CPNE4-210ENST00000512332 EDIL3O43854 480 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 FGFR1OPO95684 399 aaKnown RBP10.32□□□□□ -0.76
CPNE4-210ENST00000512332 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
CPNE4-210ENST00000512332 ZNF543Q08ER8 600 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 PSMD2Q13200 908 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 GPATCH4Q5T3I0 446 aaKnown RBP10.32□□□□□ -0.76
CPNE4-210ENST00000512332 GUF1Q8N442 669 aaKnown RBP10.32□□□□□ -0.76
CPNE4-210ENST00000512332 FUT8Q9BYC5 575 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 ZNHIT6Q9NWK9 470 aaKnown RBP10.32□□□□□ -0.76
CPNE4-210ENST00000512332 SERPINB13Q9UIV8 391 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 ATP6V0A2Q9Y487 856 aa10.32□□□□□ -0.76
CPNE4-210ENST00000512332 EIF3CLB5ME19 914 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 SLC26A4O43511 780 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 ABL1P00519 1130 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 TXKP42681 527 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 CLK2P49760 499 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 GTF2IP78347 998 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 SEPT2Q15019 361 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 KIAA0895Q8NCT3 520 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 MTMR8Q96EF0 704 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 CNOT6LQ96LI5 555 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 EIF3CQ99613 913 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 NAP1L4Q99733 375 aaKnown RBP10.31□□□□□ -0.76
CPNE4-210ENST00000512332 GLT8D2Q9H1C3 349 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 EPC1Q9H2F5 836 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 ANKZF1Q9H8Y5 726 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 MYO6Q9UM54 1294 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 QSER1Q2KHR3 1735 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 CTAGE15A4D2H0 777 aa10.31□□□□□ -0.76
CPNE4-210ENST00000512332 MAP2K7O14733 419 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms