RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
COPS4-211ENST00000511891 KRT23Q9C075 422 aa11.6□□□□□ -0.55
COPS4-211ENST00000511891 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
COPS4-211ENST00000511891 LCTP09848 1927 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 CTAGE5O15320 804 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 PQBP1O60828 265 aaKnown RBP11.59□□□□□ -0.55
COPS4-211ENST00000511891 SMPD1P17405 629 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 CALML3P27482 149 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 GJA9P57773 515 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 BEX3Q00994 111 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 TNFAIP2Q03169 654 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 USH1GQ495M9 461 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
COPS4-211ENST00000511891 C1orf53Q5VUE5 145 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 RUFY2Q8WXA3 655 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 BADQ92934 168 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 UBAC1Q9BSL1 405 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 TSEN34Q9BSV6 310 aaKnown RBP11.59□□□□□ -0.55
COPS4-211ENST00000511891 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
COPS4-211ENST00000511891 OCEL1Q9H607 264 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 STARD7Q9NQZ5 370 aa11.59□□□□□ -0.55
COPS4-211ENST00000511891 RANBP2P49792 3224 aaKnown RBP11.59□□□□□ -0.55
COPS4-211ENST00000511891 SGSM2O43147 1006 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 ASGR1P07306 291 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 CYP21A2P08686 494 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 ITGB8P26012 769 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 CST5P28325 142 aaPredicted RBP11.58□□□□□ -0.56
COPS4-211ENST00000511891 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
COPS4-211ENST00000511891 SEC23AQ15436 765 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 CDC37Q16543 378 aaPredicted RBP11.58□□□□□ -0.56
COPS4-211ENST00000511891 GNASQ5JWF2 1037 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 IFIT1BQ5T764 474 aaKnown RBP11.58□□□□□ -0.56
COPS4-211ENST00000511891 TAPT1Q6NXT6 567 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 RNF207Q6ZRF8 634 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 ADGRF4Q8IZF3 695 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 STAG2Q8N3U4 1231 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 VTI1AQ96AJ9 217 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 SPC25Q9HBM1 224 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 SENP2Q9HC62 589 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 VAT1LQ9HCJ6 419 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
COPS4-211ENST00000511891 DNAH12Q6ZR08 3092 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 WDR19Q8NEZ3 1342 aa11.58□□□□□ -0.56
COPS4-211ENST00000511891 LRRC37A2A6NM11 1700 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 MOXD2PA6NHM9 499 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 DYNC1LI2O43237 492 aaPredicted RBP11.57□□□□□ -0.56
COPS4-211ENST00000511891 DHX16O60231 1041 aaKnown RBP11.57□□□□□ -0.56
COPS4-211ENST00000511891 CLTBP09497 229 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 PARP1P09874 1014 aaKnown RBP11.57□□□□□ -0.56
COPS4-211ENST00000511891 NT5C2P49902 561 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 RPS6P62753 249 aaKnown RBP11.57□□□□□ -0.56
COPS4-211ENST00000511891 LRIT3Q3SXY7 679 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 STOX1Q6ZVD7 989 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 CHST3Q7LGC8 479 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 TLK2Q86UE8 772 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 PCSK9Q8NBP7 692 aaKnown RBP11.57□□□□□ -0.56
COPS4-211ENST00000511891 MORC4Q8TE76 937 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 NUP133Q8WUM0 1156 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 TBC1D5Q92609 795 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 LTBP2Q14767 1821 aa11.57□□□□□ -0.56
COPS4-211ENST00000511891 FAAP100Q0VG06 881 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 TRDNQ13061 729 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 SHHQ15465 462 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 Q7L0L9 218 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 AP5M1Q9H0R1 490 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 JMJD4Q9H9V9 463 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 VTA1Q9NP79 307 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 TMEM39AQ9NV64 488 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 ADD3Q9UEY8 706 aaKnown RBP11.56□□□□□ -0.56
COPS4-211ENST00000511891 PNMA2Q9UL42 364 aa11.56□□□□□ -0.56
COPS4-211ENST00000511891 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 E7EWF7 191 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 IFIT3O14879 490 aaKnown RBP11.55□□□□□ -0.56
COPS4-211ENST00000511891 KIAA0355O15063 1070 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 EPHB4P54760 987 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 NKX3-2P78367 333 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
COPS4-211ENST00000511891 SLC35G1Q2M3R5 365 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 CXCL17Q6UXB2 119 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 ANKRD33Q7Z3H0 272 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 COL20A1Q9P218 1284 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 MAD2L2Q9UI95 211 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 RBM8AQ9Y5S9 174 aaKnown RBP11.55□□□□□ -0.56
COPS4-211ENST00000511891 ELP1O95163 1332 aa11.55□□□□□ -0.56
COPS4-211ENST00000511891 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
COPS4-211ENST00000511891 KLRF2D3W0D1 207 aa11.54□□□□□ -0.56
COPS4-211ENST00000511891 ARVCFO00192 962 aa11.54□□□□□ -0.56
COPS4-211ENST00000511891 RAG1P15918 1043 aa11.54□□□□□ -0.56
COPS4-211ENST00000511891 CDK7P50613 346 aa11.54□□□□□ -0.56
COPS4-211ENST00000511891 ANTXR2P58335 489 aa11.54□□□□□ -0.56
COPS4-211ENST00000511891 PSMC6P62333 389 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms