RNA–Protein interactions for RNA: ENST00000511782.5

CAST-236, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-236ENST00000511782 ZSCAN5CA6NGD5 496 aaPredicted RBP9.18□□□□□ -0.94
CAST-236ENST00000511782 CCNT1O60563 726 aaKnown RBP9.18□□□□□ -0.94
CAST-236ENST00000511782 RPS6KA5O75582 802 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 MATR3P43243 847 aaKnown RBP eCLIP9.18□□□□□ -0.94
CAST-236ENST00000511782 HSP90B2PQ58FF3 399 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 LEKR1Q6ZMV7 388 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 LINC00116Q8NCU8 138 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 UIMC1Q96RL1 719 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 RASSF4Q9H2L5 321 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 KANSL2Q9H9L4 492 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 BARHL2Q9NY43 387 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 SAP30BPQ9UHR5 308 aaKnown RBP9.18□□□□□ -0.94
CAST-236ENST00000511782 ROBO1Q9Y6N7 1651 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 WNK3Q9BYP7 1800 aa9.18□□□□□ -0.94
CAST-236ENST00000511782 EIF3CLB5ME19 914 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 KRT86O43790 486 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 ZPR1O75312 459 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 CCNE1P24864 410 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 CALML3P27482 149 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 ASIC1P78348 528 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 ZBED6P86452 979 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 GRM4Q14833 912 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 KCNK18Q7Z418 384 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 CABP7Q86V35 215 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 POTEDQ86YR6 584 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 C2CD5Q86YS7 1000 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 ZSCAN29Q8IWY8 852 aaPredicted RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 MS4A14Q96JA4 679 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 EIF3CQ99613 913 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 TMEM47Q9BQJ4 181 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 NOC4LQ9BVI4 516 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 MED4Q9NPJ6 270 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 ATP8A2Q9NTI2 1148 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 TMEM260Q9NX78 707 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 SIK3Q9Y2K2 1263 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 IRS2Q9Y4H2 1338 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 SBF2Q86WG5 1849 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 PCP11498 1178 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 HIBADHP31937 336 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 KIF5BP33176 963 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 MTIF2P46199 727 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 STIM1Q13586 685 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 TRADDQ15628 312 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 CCDC96Q2M329 555 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 SBK1Q52WX2 424 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 AENQ8WTP8 325 aaKnown RBP9.17□□□□□ -0.94
CAST-236ENST00000511782 MTMR8Q96EF0 704 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 FGFBP2Q9BYJ0 223 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 VIPAS39Q9H9C1 493 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 BLOC1S4Q9NUP1 217 aa9.17□□□□□ -0.94
CAST-236ENST00000511782 PALM3A6NDB9 673 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 MYMKA6NI61 221 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 NUTM2BA6NNL0 878 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 NUTM2EB1AL46 878 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 EIF4A3P38919 411 aaKnown RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 VAV2P52735 878 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 RPS8P62241 208 aaKnown RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 LRRC41Q15345 812 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 ZNF662Q6ZS27 426 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 DYMQ7RTS9 669 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 CAGE1Q8TC20 777 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 AFAP1L1Q8TED9 768 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 TGFBRAP1Q8WUH2 860 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 ERGIC2Q96RQ1 377 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 VAT1LQ9HCJ6 419 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 ARPP21Q9UBL0 812 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 SNX12Q9UMY4 172 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 PLAGL2Q9UPG8 496 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 TARSL2A2RTX5 802 aaKnown RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 POTEMA6NI47 508 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 LRRC53A6NM62 1247 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 KLRF2D3W0D1 207 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 SLC37A4O43826 429 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 RASA1P20936 1047 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 KRT83P78385 493 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 GRB10Q13322 594 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 ECM1Q16610 540 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 DNAJC21Q5F1R6 531 aaKnown RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 DGKHQ86XP1 1220 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 DNAAF5Q86Y56 855 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 SPATA4Q8NEY3 305 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 SECISBP2LQ93073 1101 aaKnown RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 ARL8AQ96BM9 186 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 DHTKD1Q96HY7 919 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 IFIH1Q9BYX4 1025 aaKnown RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 GBP3Q9H0R5 595 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 SH2D4AQ9H788 454 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 SH3GLB2Q9NR46 395 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 MAGEC2Q9UBF1 373 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 BIN2Q9UBW5 565 aaPredicted RBP9.16□□□□□ -0.94
CAST-236ENST00000511782 PCDHA13Q9Y5I0 950 aa9.16□□□□□ -0.94
CAST-236ENST00000511782 MYH4Q9Y623 1939 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms