RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SCG5P05408 212 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 DUSP4Q13115 394 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 FBLN7Q53RD9 439 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 PLEKHG4Q58EX7 1191 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 SLC35F1Q5T1Q4 408 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 ZNF662Q6ZS27 426 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 CPNE8Q86YQ8 564 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 JAMLQ86YT9 394 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 SYNPOQ8N3V7 929 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 NPLOC4Q8TAT6 608 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 FRS2Q8WU20 508 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 DIO2Q92813 273 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 FCRL2Q96LA5 508 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 ALPK1Q96QP1 1244 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 ADAMTS10Q9H324 1103 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 RC3H2Q9HBD1 1191 aaKnown RBP4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 ERVK13-1Q9NX77 482 aa4.92□□□□□ -1.62
TRAPPC11-207ENST00000511409 SBNO2Q9Y2G9 1366 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 TRBV23OR9-2A0A075B6M9 112 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 A0A1W2PQ27 194 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 A0A1W2PQ64 194 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 A0A1W2PQC6 194 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 A0A1W2PQD8 194 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 ANKRD62A6NC57 917 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 DBX1A6NMT0 343 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 PLD2O14939 933 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 HK2P52789 917 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 GYS2P54840 703 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 GABREP78334 506 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 CYP4F3Q08477 520 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 RALGPS1Q5JS13 557 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 DENND5AQ6IQ26 1287 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 CYP2R1Q6VVX0 501 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 KIAA0907Q7Z7F0 614 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 KREMEN2Q8NCW0 462 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 DCAF4Q8WV16 495 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 PTPRN2Q92932 1015 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 C1orf159Q96HA4 380 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 CCDC120Q96HB5 630 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 CHAMP1Q96JM3 812 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 SFMBT1Q9UHJ3 866 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 TMEFF2Q9UIK5 374 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 TMEM59LQ9UK28 342 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 TRAF6Q9Y4K3 522 aa4.91□□□□□ -1.62
TRAPPC11-207ENST00000511409 IRS4O14654 1257 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 MYO1BO43795 1136 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 USP2O75604 605 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 LTBRP36941 435 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 PABPC4Q13310 644 aaKnown RBP eCLIP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 SLC14A2Q15849 920 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 NTRK3Q16288 839 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 FNDC3BQ53EP0 1204 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 RNF187Q5TA31 235 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 HLA-DQA1Q5Y7H0 255 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 E4F1Q66K89 784 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 IQCEQ6IPM2 695 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 KCNT2Q6UVM3 1135 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 MTDHQ86UE4 582 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 DHX37Q8IY37 1157 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 MAP6Q96JE9 813 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 PHF20Q9BVI0 1012 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 MRPL4Q9BYD3 311 aaKnown RBP4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 SLC52A2Q9HAB3 445 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 BTG4Q9NY30 223 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 CTNND2Q9UQB3 1225 aa4.9□□□□□ -1.63
TRAPPC11-207ENST00000511409 EFCAB14O75071 495 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 C6orf222P0C671 652 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 LCP1P13796 627 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 GDNFP39905 211 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 KCNAB2Q13303 367 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 INF2Q27J81 1249 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 ACBD5Q5T8D3 534 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 CEP128Q6ZU80 1094 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 MAMDC2Q7Z304 686 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 CCDC103Q8IW40 242 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 NIM1KQ8IY84 436 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 OXR1Q8N573 874 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 NINJ1Q92982 152 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 HHIPL1Q96JK4 782 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 CLUHP3Q96NS8 147 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 MMP19Q99542 508 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 TNFRSF10DQ9UBN6 386 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 PLAAQ9Y263 795 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 PCDHA2Q9Y5H9 948 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 CARMIL2Q6F5E8 1435 aa4.89□□□□□ -1.63
TRAPPC11-207ENST00000511409 AQP7O14520 342 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 NPHS1O60500 1241 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 NCLP19338 710 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 AFMP43652 599 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 RTP1P59025 263 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 GUCY1A3Q02108 690 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 DALRD3Q5D0E6 543 aaKnown RBP4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 STYK1Q6J9G0 422 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 CNNM4Q6P4Q7 775 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 BRAPQ7Z569 592 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 FILIP1Q7Z7B0 1213 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms