RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ADMP35318 185 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 DSG1Q02413 1049 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 CLEC16AQ2KHT3 1053 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 RTP2Q5QGT7 225 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 PIK3R6Q5UE93 754 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 MTDHQ86UE4 582 aaKnown RBP7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 TSPYL5Q86VY4 417 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 PI4K2BQ8TCG2 481 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 USP7Q93009 1102 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 GPRC5CQ9NQ84 441 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 GPATCH2Q9NW75 528 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 SAMD15Q9P1V8 674 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 TMEFF2Q9UIK5 374 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 RBAK-RBAKDNI3L0D1 243 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 NEMP1O14524 444 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 KATNA1O75449 491 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 GLRX3O76003 335 aaKnown RBP7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 SEPHS1P49903 392 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 SCNN1BP51168 640 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 MECP2P51608 486 aaKnown RBP7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 NEK2P51955 445 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 RBM10P98175 930 aaKnown RBP7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 GAB4Q2WGN9 574 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 THAP5Q7Z6K1 395 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 KSR1Q8IVT5 923 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 RAVER1Q8IY67 606 aaKnown RBP7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 PCDH19Q8TAB3 1148 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 CHMP4AQ9BY43 222 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 SPEF1Q9Y4P9 236 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 PCDHA8Q9Y5H6 950 aa7.38□□□□□ -1.23
HMGB1P47-201ENST00000511281 E2F8A0AVK6 867 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 GNAT3A8MTJ3 354 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 MEIS1O00470 390 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 FGF10O15520 208 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 TSPAN6O43657 245 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 PLS3P13797 630 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 PAK1Q13153 545 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 KIZQ2M2Z5 673 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 USHBP1Q8N6Y0 703 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 SMC1BQ8NDV3 1235 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 DIO2Q92813 273 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 MENTQ9BUN1 341 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 C7orf69Q9H7B7 122 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 CRTAC1Q9NQ79 661 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 SLC52A1Q9NWF4 448 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 RAXQ9Y2V3 346 aa7.37□□□□□ -1.23
HMGB1P47-201ENST00000511281 CCDC194A0A1B0GVG4 234 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 TRAF5O00463 557 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 MSCO60682 206 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 OXCT1P55809 520 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 CPSF6Q16630 551 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 NKPD1Q17RQ9 610 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 ALG1Q9BT22 464 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 TRIM8Q9BZR9 551 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 B4GALT6Q9UBX8 382 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 ZNF281Q9Y2X9 895 aa7.36□□□□□ -1.23
HMGB1P47-201ENST00000511281 PAMP19021 973 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 ADCYAP1R1P41586 468 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 LSSP48449 732 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 CLCN7P51798 805 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 TBX4P57082 545 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 PCBP3P57721 371 aaKnown RBP7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 SYDE2Q5VT97 1194 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 RNF111Q6ZNA4 994 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 ZNF765Q7L2R6 523 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 ZC3H7AQ8IWR0 971 aaKnown RBP7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 IGSF22Q8N9C0 903 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 CHST14Q8NCH0 376 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 RCBTB1Q8NDN9 531 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 CLEC1BQ9P126 229 aa7.35□□□□□ -1.23
HMGB1P47-201ENST00000511281 HMX2A2RU54 273 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 KIF3BO15066 747 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 LCP1P13796 627 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 FAPQ12884 760 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 TMEM177Q53S58 311 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 RNF43Q68DV7 783 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 C16orf59Q7L2K0 433 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 OTOP1Q7RTM1 612 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 OVCH1Q7RTY7 1134 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 CNTD1Q8N815 330 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 PANK1Q8TE04 598 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 CHMP4CQ96CF2 233 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 METTL22Q9BUU2 404 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 CDIP1Q9H305 208 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 STOML1Q9UBI4 398 aa7.34□□□□□ -1.23
HMGB1P47-201ENST00000511281 NPHP3-ACAD11A0A0J9YXS1 232 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 ZNF891A8MT65 544 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 FAM155AB1AL88 458 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 M0R2C6 588 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 GABRDO14764 452 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 GSTA4O15217 222 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 AKAP10O43572 662 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 FKBP9O95302 570 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 YBX3P16989 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 ID4P47928 161 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms