RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 FBXO46Q6PJ61 603 aaPredicted RBP12□□□□□ -0.49
NR1I3-227ENST00000510951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
NR1I3-227ENST00000510951 NSUN7Q8NE18 718 aaKnown RBP12□□□□□ -0.49
NR1I3-227ENST00000510951 SH3TC2Q8TF17 1288 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 TRIB2Q92519 343 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 TBC1D5Q92609 795 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 USP6NLQ92738 828 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 TMX3Q96JJ7 454 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 AIFM3Q96NN9 605 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 MCOLN1Q9GZU1 580 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 FLRT1Q9NZU1 646 aa12□□□□□ -0.49
NR1I3-227ENST00000510951 RBM27Q9P2N5 1060 aaKnown RBP12□□□□□ -0.49
NR1I3-227ENST00000510951 DNAJC25-GNG10A0A024R161 153 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 ADCY3O60266 1144 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 DEXIO95424 95 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 MYCP01106 439 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-227ENST00000510951 MCM2P49736 904 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 TRAF1Q13077 416 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 IRF5Q13568 498 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 ZNF792Q3KQV3 632 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 SLC9C1Q4G0N8 1177 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 FGD4Q96M96 766 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 BARHL2Q9NY43 387 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 VPS54Q9P1Q0 977 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 ORC3Q9UBD5 711 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-227ENST00000510951 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
NR1I3-227ENST00000510951 STK36Q9NRP7 1315 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 CENPFP49454 3210 aa11.99□□□□□ -0.49
NR1I3-227ENST00000510951 ASTN1O14525 1302 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 GCOM1H8Y6P7 765 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-227ENST00000510951 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 POLR2MP0CAP2 368 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 GRK4P32298 578 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 ADCY7P51828 1080 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 TRIM32Q13049 653 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 PKN2Q16513 984 aaKnown RBP11.98□□□□□ -0.49
NR1I3-227ENST00000510951 UBE2SQ16763 222 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 PPP1R18Q6NYC8 613 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 FCHSD1Q86WN1 690 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-227ENST00000510951 FAM133AQ8N9E0 248 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 SYTL5Q8TDW5 730 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-227ENST00000510951 SHISA4Q96DD7 197 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 MAML3Q96JK9 1138 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 SLC5A4Q9NY91 659 aa11.98□□□□□ -0.49
NR1I3-227ENST00000510951 BIN2Q9UBW5 565 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-227ENST00000510951 DOCK5Q9H7D0 1870 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 HMGCRP04035 888 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 INHAP05111 366 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 HOXC6P09630 235 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 XRCC5P13010 732 aaKnown RBP11.97□□□□□ -0.49
NR1I3-227ENST00000510951 CYP2C19P33261 490 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 HSD17B4P51659 736 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 HSCBQ8IWL3 235 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 CUL5Q93034 780 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 ALG1Q9BT22 464 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 GJB4Q9NTQ9 266 aa11.97□□□□□ -0.49
NR1I3-227ENST00000510951 SMCO2A6NFE2 343 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 K7ELQ4 463 aaPredicted RBP11.96□□□□□ -0.49
NR1I3-227ENST00000510951 ADAMTS3O15072 1205 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 FDPSP14324 419 aaKnown RBP11.96□□□□□ -0.49
NR1I3-227ENST00000510951 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.49
NR1I3-227ENST00000510951 ALDH5A1P51649 535 aaPredicted RBP11.96□□□□□ -0.49
NR1I3-227ENST00000510951 UBXN2AP68543 259 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 ARMCX2Q7L311 632 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 CCDC148Q8NFR7 591 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 PXYLP1Q8TE99 480 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.49
NR1I3-227ENST00000510951 PGBD1Q96JS3 809 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
NR1I3-227ENST00000510951 MEIS2O14770 477 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
NR1I3-227ENST00000510951 NLRP5P59047 1200 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 GHRHRQ02643 423 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 ARHGEF16Q5VV41 709 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 MFSD14CQ5VZR4 134 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
NR1I3-227ENST00000510951 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 WASF1Q92558 559 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 RMDN3Q96TC7 470 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
NR1I3-227ENST00000510951 RIC8AQ9NPQ8 531 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 TMEM260Q9NX78 707 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 ADD3Q9UEY8 706 aaKnown RBP11.95□□□□□ -0.5
NR1I3-227ENST00000510951 KCNJ14Q9UNX9 436 aa11.95□□□□□ -0.5
NR1I3-227ENST00000510951 DIS3Q9Y2L1 958 aaKnown RBP11.95□□□□□ -0.5
NR1I3-227ENST00000510951 KIAA0100Q14667 2235 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms