RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 MYL10Q9BUA6 226 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 VTA1Q9NP79 307 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 CTAGE5O15320 804 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 SMPD1P17405 629 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 GJA9P57773 515 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 TNFAIP2Q03169 654 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 KCNA10Q16322 511 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 TMEM63BQ5T3F8 832 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 TAPT1Q6NXT6 567 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 NOL8Q76FK4 1167 aaKnown RBP21.61■■□□□ 1.05
LSM6-206ENST00000510331 TLK2Q86UE8 772 aa21.61■■□□□ 1.05
LSM6-206ENST00000510331 GNEQ9Y223 722 aaKnown RBP21.61■■□□□ 1.05
LSM6-206ENST00000510331 MOXD2PA6NHM9 499 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 SH2B2O14492 632 aaPredicted RBP21.6■■□□□ 1.05
LSM6-206ENST00000510331 BEX3Q00994 111 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 CASC1Q6TDU7 716 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 CATIPQ7Z7H3 387 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 HOMER1Q86YM7 354 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 TBC1D5Q92609 795 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 MTMR8Q96EF0 704 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 TSEN34Q9BSV6 310 aaKnown RBP21.6■■□□□ 1.05
LSM6-206ENST00000510331 COL20A1Q9P218 1284 aa21.6■■□□□ 1.05
LSM6-206ENST00000510331 OPLAHO14841 1288 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 ZBTB5O15062 677 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 EDNRBP24530 442 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 MDM2Q00987 491 aaPredicted RBP21.59■■□□□ 1.05
LSM6-206ENST00000510331 C1orf53Q5VUE5 145 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 ZNF654Q8IZM8 581 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 NUP133Q8WUM0 1156 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 SPC25Q9HBM1 224 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 PRDM5Q9NQX1 630 aaPredicted RBP21.59■■□□□ 1.05
LSM6-206ENST00000510331 STARD7Q9NQZ5 370 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 PDLIM7Q9NR12 457 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 KIAA1217Q5T5P2 1943 aa21.59■■□□□ 1.05
LSM6-206ENST00000510331 LOC102724159A0A0B4J2E5 919 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 CYTH3O43739 400 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 DDAH1O94760 285 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 ASGR1P07306 291 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 MCM5P33992 734 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 PDE4DQ08499 809 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 PWP2Q15269 919 aaKnown RBP21.58■■□□□ 1.05
LSM6-206ENST00000510331 RGS22Q8NE09 1264 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 DNERQ8NFT8 737 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 SYTL5Q8TDW5 730 aaPredicted RBP21.58■■□□□ 1.05
LSM6-206ENST00000510331 PIGSQ96S52 555 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 AMNQ9BXJ7 453 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 LRRC2Q9BYS8 371 aa21.58■■□□□ 1.05
LSM6-206ENST00000510331 PQBP1O60828 265 aaKnown RBP21.57■■□□□ 1.04
LSM6-206ENST00000510331 TLE2Q04725 743 aa21.57■■□□□ 1.04
LSM6-206ENST00000510331 GNASQ5JWF2 1037 aa21.57■■□□□ 1.04
LSM6-206ENST00000510331 SH3RF1Q7Z6J0 888 aa21.57■■□□□ 1.04
LSM6-206ENST00000510331 RIOX1Q9H6W3 641 aa21.57■■□□□ 1.04
LSM6-206ENST00000510331 MRPL11Q9Y3B7 192 aaKnown RBP21.57■■□□□ 1.04
LSM6-206ENST00000510331 A0A1W2PPC1 479 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 BMP8BP34820 402 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 NKX3-2P78367 333 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 FSCN1Q16658 493 aaKnown RBP21.56■■□□□ 1.04
LSM6-206ENST00000510331 NFXL1Q6ZNB6 911 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 MCF2L2Q86YR7 1114 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 RAB11FIP4Q86YS3 637 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 PCSK9Q8NBP7 692 aaKnown RBP21.56■■□□□ 1.04
LSM6-206ENST00000510331 TMEM87BQ96K49 555 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 UBE2OQ9C0C9 1292 aaKnown RBP21.56■■□□□ 1.04
LSM6-206ENST00000510331 PRKAG2Q9UGJ0 569 aa21.56■■□□□ 1.04
LSM6-206ENST00000510331 DYNC1LI2O43237 492 aaPredicted RBP21.55■■□□□ 1.04
LSM6-206ENST00000510331 CFBP00751 764 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 RXRAP19793 462 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 DUSP28Q4G0W2 176 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 IQSEC1Q6DN90 963 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 RASEFQ8IZ41 740 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 PIBF1Q8WXW3 757 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 GLT1D1Q96MS3 346 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 TAAR1Q96RJ0 339 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 WDR11Q9BZH6 1224 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 PCDHA1Q9Y5I3 950 aa21.55■■□□□ 1.04
LSM6-206ENST00000510331 RBM47A0AV96 593 aaKnown RBP21.54■■□□□ 1.04
LSM6-206ENST00000510331 TRIM43BA6NCK2 446 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 SOX1O00570 391 aaPredicted RBP21.54■■□□□ 1.04
LSM6-206ENST00000510331 PLEKHA8P1O95397 391 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 CLTBP09497 229 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 HSD17B4P51659 736 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 CXCL17Q6UXB2 119 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 CTCFLQ8NI51 663 aaPredicted RBP21.54■■□□□ 1.04
LSM6-206ENST00000510331 TRIM43Q96BQ3 446 aaPredicted RBP21.54■■□□□ 1.04
LSM6-206ENST00000510331 TCEANC2Q96MN5 208 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 MPHOSPH6Q99547 160 aaKnown RBP21.54■■□□□ 1.04
LSM6-206ENST00000510331 AP5M1Q9H0R1 490 aa21.54■■□□□ 1.04
LSM6-206ENST00000510331 CCDC69A6NI79 296 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
LSM6-206ENST00000510331 GHRHRQ02643 423 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 PPP2R5BQ15173 497 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 ADCK5Q3MIX3 580 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 RMDN3Q96TC7 470 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 LBHD1Q9BQE6 289 aaPredicted RBP21.53■■□□□ 1.04
LSM6-206ENST00000510331 MAF1Q9H063 256 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 ELP1O95163 1332 aa21.53■■□□□ 1.04
LSM6-206ENST00000510331 LAMA2P24043 3122 aaKnown RBP21.52■■□□□ 1.04
LSM6-206ENST00000510331 A0A0U1RQG5 324 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms