RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ALDH5A1P51649 535 aaPredicted RBP18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 NKX3-2P78367 333 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 KRT32Q14532 448 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 NFXL1Q6ZNB6 911 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 RNF180Q86T96 592 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 MCF2L2Q86YR7 1114 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 DNERQ8NFT8 737 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 TAAR1Q96RJ0 339 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 TSEN34Q9BSV6 310 aaKnown RBP18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 PHF24Q9UPV7 400 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 MCM3APO60318 1980 aa18.75■□□□□ 0.59
PDLIM5-212ENST00000509333 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 KBTBD13C9JR72 458 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 GJA9P57773 515 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 IRX5P78411 483 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 TMEM63BQ5T3F8 832 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 FERMT2Q96AC1 680 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 LZTS2Q9BRK4 669 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 USP26Q9BXU7 913 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 COL20A1Q9P218 1284 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 GNEQ9Y223 722 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 SNX14Q9Y5W7 946 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
PDLIM5-212ENST00000509333 RBM47A0AV96 593 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 CTAGE5O15320 804 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 REC8O95072 547 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 SMPD1P17405 629 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 EDNRBP24530 442 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 KIF5BP33176 963 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 GNAQP50148 359 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 ATN1P54259 1190 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 GHRHRQ02643 423 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 KCNA10Q16322 511 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 CTCFLQ8NI51 663 aaPredicted RBP18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 TCEANC2Q96MN5 208 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 UPF3AQ9H1J1 476 aaKnown RBP18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 VTA1Q9NP79 307 aa18.73■□□□□ 0.59
PDLIM5-212ENST00000509333 MYADML2A6NDP7 307 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 EPB41L2O43491 1005 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 CALM1P0DP23 149 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 CALM2P0DP24 149 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 CALM3P0DP25 149 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 RXRAP19793 462 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 TRAF1Q13077 416 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 C7orf61Q8IZ16 206 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 SAMD3Q8N6K7 520 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 MAP3K20Q9NYL2 800 aaKnown RBP18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 COLQQ9Y215 455 aaPredicted RBP18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 Q9Y3F1 56 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 SYNRGQ9UMZ2 1314 aa18.72■□□□□ 0.59
PDLIM5-212ENST00000509333 DYNC1LI2O43237 492 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 PLEKHA8P1O95397 391 aa18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 CST5P28325 142 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 HSD17B4P51659 736 aa18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 SNX17Q15036 470 aa18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 FBXO16Q8IX29 292 aaPredicted RBP18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
PDLIM5-212ENST00000509333 B4DLN1 442 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 CFBP00751 764 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 CPA1P15085 419 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 PTGS1P23219 599 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 MRPL12P52815 198 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 ACLYP53396 1101 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 PDE4DQ08499 809 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 DUSP28Q4G0W2 176 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 GNASQ5JWF2 1037 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 NOL8Q76FK4 1167 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 RAB11FIP4Q86YS3 637 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 CMTR1Q8N1G2 835 aaKnown RBP18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 PIBF1Q8WXW3 757 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 RMDN3Q96TC7 470 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 PRO3102Q9H379 93 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 SPC25Q9HBM1 224 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 ZMYND8Q9ULU4 1186 aaPredicted RBP18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 DNAH12Q6ZR08 3092 aa18.7■□□□□ 0.58
PDLIM5-212ENST00000509333 C6orf222P0C671 652 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 RTP1P59025 263 aa18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 PCSK9Q8NBP7 692 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 RRP36Q96EU6 259 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 JAKMIP1Q96N16 626 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 MPHOSPH6Q99547 160 aaKnown RBP18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 FAM217BQ9NTX9 383 aaPredicted RBP18.69■□□□□ 0.58
PDLIM5-212ENST00000509333 LCTP09848 1927 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 ALPK3Q96L96 1907 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms