RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 C16orf59Q7L2K0 433 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 RGS22Q8NE09 1264 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMAD5-205ENST00000509297 LCTP09848 1927 aa18.1■□□□□ 0.49
SMAD5-205ENST00000509297 GRIN2DO15399 1336 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 NEDD4P46934 1319 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 IGHDP01880 384 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 TMEM240Q5SV17 173 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 PSRC1Q6PGN9 363 aaPredicted RBP18.09■□□□□ 0.49
SMAD5-205ENST00000509297 RNF207Q6ZRF8 634 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 EEPD1Q7L9B9 569 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 DNERQ8NFT8 737 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 PURBQ96QR8 312 aaKnown RBP18.09■□□□□ 0.49
SMAD5-205ENST00000509297 MPHOSPH6Q99547 160 aaKnown RBP18.09■□□□□ 0.49
SMAD5-205ENST00000509297 DIAPH3Q9NSV4 1193 aa18.09■□□□□ 0.49
SMAD5-205ENST00000509297 DDX49Q9Y6V7 483 aaKnown RBP18.09■□□□□ 0.49
SMAD5-205ENST00000509297 PTPDC1A2A3K4 754 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 CSF2RAP15509 400 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 EDNRBP24530 442 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 IQCA1Q86XH1 822 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMAD5-205ENST00000509297 DSCC1Q9BVC3 393 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 WDR11Q9BZH6 1224 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 CHD9Q3L8U1 2897 aa18.08■□□□□ 0.48
SMAD5-205ENST00000509297 B4DLN1 442 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 DNAJB2P25686 324 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 CPT1AP50416 773 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
SMAD5-205ENST00000509297 RPS6P62753 249 aaKnown RBP18.07■□□□□ 0.48
SMAD5-205ENST00000509297 TMEM63BQ5T3F8 832 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 CWC27Q6UX04 472 aaKnown RBP18.07■□□□□ 0.48
SMAD5-205ENST00000509297 SLC30A10Q6XR72 485 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 IL23AQ9NPF7 189 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 POLR3EQ9NVU0 708 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 PRUNE2Q8WUY3 3088 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
SMAD5-205ENST00000509297 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMAD5-205ENST00000509297 CALML3P27482 149 aa18.06■□□□□ 0.48
SMAD5-205ENST00000509297 PNMA1Q8ND90 353 aa18.06■□□□□ 0.48
SMAD5-205ENST00000509297 PPP1R12CQ9BZL4 782 aa18.06■□□□□ 0.48
SMAD5-205ENST00000509297 HIPK3Q9H422 1215 aa18.06■□□□□ 0.48
SMAD5-205ENST00000509297 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
SMAD5-205ENST00000509297 KDM4AO75164 1064 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 PTGS1P23219 599 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 CYP2C18P33260 490 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 PDE4DQ08499 809 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 IMMTQ16891 758 aaKnown RBP18.05■□□□□ 0.48
SMAD5-205ENST00000509297 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 ZNF365Q70YC5 407 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
SMAD5-205ENST00000509297 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 SCFD2Q8WU76 684 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 MYLIPQ8WY64 445 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 HERVK_113Q902F9 699 aa18.05■□□□□ 0.48
SMAD5-205ENST00000509297 ZSCAN10Q96SZ4 725 aaPredicted RBP18.05■□□□□ 0.48
SMAD5-205ENST00000509297 NOC4LQ9BVI4 516 aaKnown RBP18.05■□□□□ 0.48
SMAD5-205ENST00000509297 B4GALT4O60513 344 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 KPNA6O60684 536 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 FOSL2P15408 326 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 PURAQ00577 322 aaKnown RBP18.04■□□□□ 0.48
SMAD5-205ENST00000509297 BRDTQ58F21 947 aaPredicted RBP18.04■□□□□ 0.48
SMAD5-205ENST00000509297 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
SMAD5-205ENST00000509297 TIFAQ96CG3 184 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 ZKSCAN3Q9BRR0 538 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 KRT23Q9C075 422 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 TRPV6Q9H1D0 765 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
SMAD5-205ENST00000509297 MTIF3Q9H2K0 278 aaKnown RBP18.04■□□□□ 0.48
SMAD5-205ENST00000509297 KAT14Q9H8E8 782 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 CNNM2Q9H8M5 875 aa18.04■□□□□ 0.48
SMAD5-205ENST00000509297 ABCB11O95342 1321 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 RAD50Q92878 1312 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 A6NJR5 290 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 SUPT20HL2P0C7V6 817 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 GOLGA8HP0CJ92 632 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 PSMC6P62333 389 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 PPP2R5BQ15173 497 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 MTG1Q9BT17 334 aaPredicted RBP18.03■□□□□ 0.48
SMAD5-205ENST00000509297 ZNF576Q9H609 170 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 ZSWIM5Q9P217 1185 aa18.03■□□□□ 0.48
SMAD5-205ENST00000509297 B4E1Z4 1266 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 FGBP02675 491 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 ACRP10323 421 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 VCANP13611 3396 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 GRIN2CQ14957 1233 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 CDC37Q16543 378 aaPredicted RBP18.02■□□□□ 0.48
SMAD5-205ENST00000509297 OR6J1Q8NGC5 347 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
SMAD5-205ENST00000509297 PBX4Q9BYU1 374 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 UBA5Q9GZZ9 404 aa18.02■□□□□ 0.48
SMAD5-205ENST00000509297 TNKSO95271 1327 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 UMODL1Q5DID0 1318 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 PTPN11Q06124 597 aaPredicted RBP18.01■□□□□ 0.47
SMAD5-205ENST00000509297 RAB30Q15771 203 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 USH1GQ495M9 461 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 NFRKBQ6P4R8 1299 aa18.01■□□□□ 0.47
SMAD5-205ENST00000509297 MCF2L2Q86YR7 1114 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms