RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 PCDHA8Q9Y5H6 950 aa16.4■□□□□ 0.22
SPOCK1-206ENST00000509293 PFASO15067 1338 aa16.4■□□□□ 0.22
SPOCK1-206ENST00000509293 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 NFIBO00712 420 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 ERCC3P19447 782 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 HTRA3P83110 453 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 NR5A1Q13285 461 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 CRHR2Q13324 411 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 ATL3Q6DD88 541 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 ABRAQ8N0Z2 381 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 HOMER2Q9NSB8 354 aa16.39■□□□□ 0.21
SPOCK1-206ENST00000509293 CCDC194A0A1B0GVG4 234 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 STRNO43815 780 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 CFBP00751 764 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 MAPK4P31152 587 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 TRAPPC10P48553 1259 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 RNF207Q6ZRF8 634 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 CYP39A1Q9NYL5 469 aa16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
SPOCK1-206ENST00000509293 ADAMTS3O15072 1205 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 PEX10O60683 326 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 RPS6P62753 249 aaKnown RBP16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 UBE2SQ16763 222 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 MYSM1Q5VVJ2 828 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 SYTL5Q8TDW5 730 aaPredicted RBP16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 EHMT1Q9H9B1 1298 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 A1CFQ9NQ94 594 aaKnown RBP16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 SAGE1Q9NXZ1 904 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
SPOCK1-206ENST00000509293 SPDYE3A6NKU9 549 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 FCER1AP12319 257 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 NOM1Q5C9Z4 860 aaKnown RBP16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 NSMFQ6X4W1 530 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 PIK3AP1Q6ZUJ8 805 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 ANO3Q9BYT9 981 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 PORCNQ9H237 461 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 FRMPD4Q14CM0 1322 aa16.36■□□□□ 0.21
SPOCK1-206ENST00000509293 LOC102724159A0A0B4J2E5 919 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 SREBF1P36956 1147 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 KCTD2Q14681 263 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 EARS2Q5JPH6 523 aaKnown RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 CCAR1Q8IX12 1150 aaKnown RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 CRYGNQ8WXF5 182 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 ZNF396Q96N95 335 aaPredicted RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 EFCC1Q9HA90 598 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 TMEM260Q9NX78 707 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 NOL7Q9UMY1 257 aaKnown RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 RPTORQ8N122 1335 aa16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
SPOCK1-206ENST00000509293 DNAJC25-GNG10A0A024R161 153 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 CYP3A4P08684 503 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 USP11P51784 963 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 FOXD4L5Q5VV16 416 aaPredicted RBP16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 XRRA1Q6P2D8 792 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 MOXD1Q6UVY6 613 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 PLEKHH3Q7Z736 793 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 DNERQ8NFT8 737 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 TBCKQ8TEA7 893 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 FOXD4L4Q8WXT5 416 aaPredicted RBP16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 TNPO1Q92973 898 aaKnown RBP16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 MMP19Q99542 508 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 NAP1L4Q99733 375 aaKnown RBP16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 IVNS1ABPQ9Y6Y0 642 aa16.34■□□□□ 0.21
SPOCK1-206ENST00000509293 SLC15A5A6NIM6 579 aa16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 FAM133AQ8N9E0 248 aa16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 COL20A1Q9P218 1284 aa16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.2
SPOCK1-206ENST00000509293 FAM205CA6NFA0 338 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 TRPA1O75762 1119 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 BMP15O95972 392 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 GCFC2P16383 781 aaKnown RBP16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 PTPREP23469 700 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 CIITAP33076 1130 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
SPOCK1-206ENST00000509293 GRB14Q14449 540 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms