RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-221	ENST00000509148	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	TAPT1	Q6NXT6	567 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	KIAA1211	Q6ZU35	1233 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	EEPD1	Q7L9B9	569 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	FBXO16	Q8IX29	292 aa	Predicted RBP	11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	RGS22	Q8NE09	1264 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	DNER	Q8NFT8	737 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	CLEC4D	Q8WXI8	215 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	SMCHD1	A6NHR9	2005 aa		11.67	□□□□□ -0.54
RACK1-221	ENST00000509148	TIMP1	P01033	207 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	PARP1	P09874	1014 aa	Known RBP	11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	GOLGA8H	P0CJ92	632 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	GSPT1	P15170	499 aa	Known RBP	11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	RPS6	P62753	249 aa	Known RBP	11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	BEX3	Q00994	111 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	PDE4D	Q08499	809 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	DUSP28	Q4G0W2	176 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	BRDT	Q58F21	947 aa	Predicted RBP	11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	IFIT1B	Q5T764	474 aa	Known RBP	11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	ENAH	Q8N8S7	591 aa	Predicted RBP	11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	UBA5	Q9GZZ9	404 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	PDGFC	Q9NRA1	345 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	MTMR10	Q9NXD2	777 aa		11.66	□□□□□ -0.54
RACK1-221	ENST00000509148	ABCB11	O95342	1321 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	NKRF	O15226	690 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	CTAGE5	O15320	804 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	DHX16	O60231	1041 aa	Known RBP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	ITGB8	P26012	769 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	IRX5	P78411	483 aa	Predicted RBP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	SMAD3	P84022	425 aa	Known RBP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	CDC37	Q16543	378 aa	Predicted RBP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	USH1G	Q495M9	461 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	C9orf50	Q5SZB4	431 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	ZNF697	Q5TEC3	545 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	MFSD5	Q6N075	450 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	CXCL17	Q6UXB2	119 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	SLC30A10	Q6XR72	485 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148		Q7L0L9	218 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	MCF2L2	Q86YR7	1114 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	ADGRF4	Q8IZF3	695 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	RNPC3	Q96LT9	517 aa	Known RBP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	PURB	Q96QR8	312 aa	Known RBP	11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	WDR11	Q9BZH6	1224 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	TBX21	Q9UL17	535 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	STXBP5L	Q9Y2K9	1186 aa		11.65	□□□□□ -0.54
RACK1-221	ENST00000509148	RBM47	A0AV96	593 aa	Known RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	ERICH2	A1L162	156 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	CHML	P26374	656 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	CPT1A	P50416	773 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	IRX6	P78412	446 aa	Predicted RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	PPIG	Q13427	754 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	ITGA7	Q13683	1181 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	SART3	Q15020	963 aa	Known RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	PPP2R5B	Q15173	497 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	RALYL	Q86SE5	291 aa	Known RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	FBXO11	Q86XK2	927 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	FAM126B	Q8IXS8	530 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	TMEM199	Q8N511	208 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	SLC43A3	Q8NBI5	491 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	SCFD2	Q8WU76	684 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	GPHN	Q9NQX3	736 aa	Predicted RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	POLR3E	Q9NVU0	708 aa		11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	MRPL11	Q9Y3B7	192 aa	Known RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	DDX49	Q9Y6V7	483 aa	Known RBP	11.64	□□□□□ -0.55
RACK1-221	ENST00000509148	EDNRB	P24530	442 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	TRAF1	Q13077	416 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	SLC17A8	Q8NDX2	589 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	OR6J1	Q8NGC5	347 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	NSUN6	Q8TEA1	469 aa	Known RBP	11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	IL25	Q9H293	177 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	CPVL	Q9H3G5	476 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	VAT1L	Q9HCJ6	419 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	LAMA2	P24043	3122 aa	Known RBP	11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	LTBP2	Q14767	1821 aa		11.63	□□□□□ -0.55
RACK1-221	ENST00000509148	KLRF2	D3W0D1	207 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	IFIT3	O14879	490 aa	Known RBP	11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	SGSM2	O43147	1006 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	KPNA6	O60684	536 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	CD4	P01730	458 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	CYP21A2	P08686	494 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	SUPT20HL2	P0C7V6	817 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	TTLL4	Q14679	1199 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	SEC23A	Q15436	765 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	QRICH1	Q2TAL8	776 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	NCOA7	Q8NI08	942 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	IWS1	Q96ST2	819 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	AMN	Q9BXJ7	453 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	JMJD4	Q9H9V9	463 aa		11.62	□□□□□ -0.55
RACK1-221	ENST00000509148	TMEM265	A0A087WTH1	108 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	TXN	P10599	105 aa	Known RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	EPHB4	P54760	987 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	PTH1R	Q03431	593 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	STXBP2	Q15833	593 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	ARHGEF16	Q5VV41	709 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	CYB5R4	Q7L1T6	521 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	SAMD3	Q8N6K7	520 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms