RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
PDPN-208ENST00000509009 LTBP2Q14767 1821 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 RBM47A0AV96 593 aaKnown RBP14.65□□□□□ -0.06
PDPN-208ENST00000509009 CABYRO75952 493 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 RPS6P62753 249 aaKnown RBP14.65□□□□□ -0.06
PDPN-208ENST00000509009 SMAD3P84022 425 aaKnown RBP14.65□□□□□ -0.06
PDPN-208ENST00000509009 DUSP28Q4G0W2 176 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 FAM126BQ8IXS8 530 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
PDPN-208ENST00000509009 RGS22Q8NE09 1264 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 KRT23Q9C075 422 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 KAT14Q9H8E8 782 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 GRIN2DO15399 1336 aa14.65□□□□□ -0.06
PDPN-208ENST00000509009 ZEB2O60315 1214 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 CD4P01730 458 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 GSPT1P15170 499 aaKnown RBP14.64□□□□□ -0.07
PDPN-208ENST00000509009 ITGA7Q13683 1181 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 TTC22Q5TAA0 569 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 SLC30A10Q6XR72 485 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 C16orf59Q7L2K0 433 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 ADGRF4Q8IZF3 695 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 TBC1D5Q92609 795 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 FAM161BQ96MY7 647 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 GUCD1Q96NT3 240 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 WDR11Q9BZH6 1224 aa14.64□□□□□ -0.07
PDPN-208ENST00000509009 TLR3O15455 904 aaKnown RBP14.63□□□□□ -0.07
PDPN-208ENST00000509009 EDNRBP24530 442 aa14.63□□□□□ -0.07
PDPN-208ENST00000509009 USH1GQ495M9 461 aa14.63□□□□□ -0.07
PDPN-208ENST00000509009 ZNF697Q5TEC3 545 aa14.63□□□□□ -0.07
PDPN-208ENST00000509009 DNERQ8NFT8 737 aa14.63□□□□□ -0.07
PDPN-208ENST00000509009 RNPC3Q96LT9 517 aaKnown RBP14.63□□□□□ -0.07
PDPN-208ENST00000509009 SEZ6LQ9BYH1 1024 aa14.63□□□□□ -0.07
PDPN-208ENST00000509009 CNNM2Q9H8M5 875 aa14.63□□□□□ -0.07
PDPN-208ENST00000509009 CHMLP26374 656 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
PDPN-208ENST00000509009 PDE4DQ08499 809 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 ASPRV1Q53RT3 343 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDPN-208ENST00000509009 MAF1Q9H063 256 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 JMJD4Q9H9V9 463 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 VAT1LQ9HCJ6 419 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 TNKSO95271 1327 aa14.62□□□□□ -0.07
PDPN-208ENST00000509009 CUL9Q8IWT3 2517 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.61□□□□□ -0.07
PDPN-208ENST00000509009 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.61□□□□□ -0.07
PDPN-208ENST00000509009 PARP1P09874 1014 aaKnown RBP14.61□□□□□ -0.07
PDPN-208ENST00000509009 CSF2RAP15509 400 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 CYP2C18P33260 490 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 PSMC6P62333 389 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 PTH1RQ03431 593 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 PPIGQ13427 754 aaKnown RBP eCLIP14.61□□□□□ -0.07
PDPN-208ENST00000509009 SEC23AQ15436 765 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
PDPN-208ENST00000509009 TMEM240Q5SV17 173 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 TMEM199Q8N511 208 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 TAAR1Q96RJ0 339 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 CDX2Q99626 313 aaPredicted RBP14.61□□□□□ -0.07
PDPN-208ENST00000509009 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 PPP1R12CQ9BZL4 782 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 TRPV6Q9H1D0 765 aa14.61□□□□□ -0.07
PDPN-208ENST00000509009 TTYH1Q9H313 450 aaPredicted RBP14.61□□□□□ -0.07
PDPN-208ENST00000509009 B4DLN1 442 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 MRPL12P52815 198 aaKnown RBP14.6□□□□□ -0.07
PDPN-208ENST00000509009 QRICH1Q2TAL8 776 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 IFIT1BQ5T764 474 aaKnown RBP14.6□□□□□ -0.07
PDPN-208ENST00000509009 FBXO11Q86XK2 927 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 STAG2Q8N3U4 1231 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 SYTL5Q8TDW5 730 aaPredicted RBP14.6□□□□□ -0.07
PDPN-208ENST00000509009 SCFD2Q8WU76 684 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 RUFY2Q8WXA3 655 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 MPHOSPH6Q99547 160 aaKnown RBP14.6□□□□□ -0.07
PDPN-208ENST00000509009 POLR3EQ9NVU0 708 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 LCTP09848 1927 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 ABCB11O95342 1321 aa14.6□□□□□ -0.07
PDPN-208ENST00000509009 NKRFO15226 690 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDPN-208ENST00000509009 MYL3P08590 195 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 CYP21A2P08686 494 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 ACRP10323 421 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 CPT1AP50416 773 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 PURAQ00577 322 aaKnown RBP14.59□□□□□ -0.07
PDPN-208ENST00000509009 RASIP1Q5U651 963 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 ZNF365Q70YC5 407 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 MCF2L2Q86YR7 1114 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 OR6J1Q8NGC5 347 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 COPS5Q92905 334 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 IL23AQ9NPF7 189 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 COL20A1Q9P218 1284 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 MRPL11Q9Y3B7 192 aaKnown RBP14.59□□□□□ -0.07
PDPN-208ENST00000509009 RAD50Q92878 1312 aa14.59□□□□□ -0.07
PDPN-208ENST00000509009 A6NJR5 290 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 KLRF2D3W0D1 207 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 DHX16O60231 1041 aaKnown RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 B4GALT4O60513 344 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 ARIH2O95376 493 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 TXNP10599 105 aaKnown RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 TRDNQ13061 729 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms