RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 TRIM60Q495X7 471 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 SLC39A5Q6ZMH5 540 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 MORC4Q8TE76 937 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 PPP1R13LQ8WUF5 828 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 TAAR1Q96RJ0 339 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 GDF15Q99988 308 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 UBAC1Q9BSL1 405 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 PHF24Q9UPV7 400 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 GNEQ9Y223 722 aaKnown RBP10.11□□□□□ -0.79
SNCA-211ENST00000508895 WDR19Q8NEZ3 1342 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 PTPDC1A2A3K4 754 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 TRIM43BA6NCK2 446 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 KLRF2D3W0D1 207 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 SH2B2O14492 632 aaPredicted RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 PRC1O43663 620 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 MSCO60682 206 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 ARIH2O95376 493 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 PLEKHA8P1O95397 391 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 PARP1P09874 1014 aaKnown RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 AKR1A1P14550 325 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 MAGEA10P43363 369 aaPredicted RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 ALDH5A1P51649 535 aaPredicted RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 KCNA10Q16322 511 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 ASPRV1Q53RT3 343 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 TMEM67Q5HYA8 995 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 GPATCH4Q5T3I0 446 aaKnown RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 MSL3Q8N5Y2 521 aaKnown RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 PIBF1Q8WXW3 757 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 COPS5Q92905 334 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 TRIM43Q96BQ3 446 aaPredicted RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 PIGSQ96S52 555 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 UPF3AQ9H1J1 476 aaKnown RBP10.1□□□□□ -0.79
SNCA-211ENST00000508895 NRBP1Q9UHY1 535 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 FAM184BQ9ULE4 1060 aa10.1□□□□□ -0.79
SNCA-211ENST00000508895 A0A1W2PQ45 241 aaPredicted RBP10.09□□□□□ -0.79
SNCA-211ENST00000508895 A0A1W2PQY0 241 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 hCG_1642624A0A1W2PR95 340 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 RARBP10826 455 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 EDNRBP24530 442 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 MCM5P33992 734 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 KRT32Q14532 448 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 WTAPQ15007 396 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 SNX17Q15036 470 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 CCDC178Q5BJE1 867 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 SYTL5Q8TDW5 730 aaPredicted RBP10.09□□□□□ -0.79
SNCA-211ENST00000508895 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
SNCA-211ENST00000508895 ABHD16BQ9H3Z7 469 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 RIOX1Q9H6W3 641 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 CNPY2Q9Y2B0 182 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 ATP11BQ9Y2G3 1177 aa10.09□□□□□ -0.79
SNCA-211ENST00000508895 GRIN2DO15399 1336 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 TRIP12Q14669 1992 aaPredicted RBP10.08□□□□□ -0.8
SNCA-211ENST00000508895 WDR81Q562E7 1941 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 KBTBD13C9JR72 458 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 DUSP11O75319 330 aaKnown RBP10.08□□□□□ -0.8
SNCA-211ENST00000508895 CAPN2P17655 700 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 ACLYP53396 1101 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 GJA9P57773 515 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 MDM2Q00987 491 aaPredicted RBP10.08□□□□□ -0.8
SNCA-211ENST00000508895 EXOSC10Q01780 885 aaKnown RBP10.08□□□□□ -0.8
SNCA-211ENST00000508895 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 FBXO11Q86XK2 927 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 ZNF654Q8IZM8 581 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 SRBD1Q8N5C6 995 aaKnown RBP10.08□□□□□ -0.8
SNCA-211ENST00000508895 ARRDC4Q8NCT1 418 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 IL31RAQ8NI17 732 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 NEK1Q96PY6 1258 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 PDLIM7Q9NR12 457 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 BRPF3Q9ULD4 1205 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 NR2E3Q9Y5X4 410 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
SNCA-211ENST00000508895 RBM47A0AV96 593 aaKnown RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 ADAMTS3O15072 1205 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 RGS20O76081 388 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 ASGR1P07306 291 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 C6orf222P0C671 652 aaPredicted RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 HOXA13P31271 388 aaPredicted RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 EPHB4P54760 987 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 NKX3-2P78367 333 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 TNFAIP2Q03169 654 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 TLE2Q04725 743 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 SART3Q15020 963 aaKnown RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 NUP133Q8WUM0 1156 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
SNCA-211ENST00000508895 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 MTA3Q9BTC8 594 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
SNCA-211ENST00000508895 TELO2Q9Y4R8 837 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 ABCB11O95342 1321 aa10.07□□□□□ -0.8
SNCA-211ENST00000508895 SCN5AQ14524 2016 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 MYH15Q9Y2K3 1946 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 ASB14A6NK59 587 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms