RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MMP14P50281 582 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 RBM5P52756 815 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 GPSM2P81274 684 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 SREBF2Q12772 1141 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 MRPL58Q14197 206 aaKnown RBP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 ARHGEF6Q15052 776 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 SF3B3Q15393 1217 aaKnown RBP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 PROSER3Q2NL68 480 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 OTUD7BQ6GQQ9 843 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 IGF2-ASQ6U949 168 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 ACAD11Q709F0 780 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 ARMC9Q7Z3E5 817 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 AGGF1Q8N302 714 aaeCLIP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 AGBL3Q8NEM8 1001 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 TBC1D16Q8TBP0 767 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 MRRFQ96E11 262 aaKnown RBP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 ABHD8Q96I13 439 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 TRIM56Q9BRZ2 755 aaKnown RBP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 CEP44Q9C0F1 390 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 MRPL18Q9H0U6 180 aaKnown RBP4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 MAP3K2Q9Y2U5 619 aa4.73□□□□□ -1.65
HMGN1P11-201ENST00000508668 NUP98P52948 1817 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 ANKRD18BA2A2Z9 1011 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 UNCXA6NJT0 531 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 C9orf172C9J069 976 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 AOC2O75106 756 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 ECEL1O95672 775 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 CYP11A1P05108 521 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 PCCAP05165 728 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 CELA3AP09093 270 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 HSPA8P11142 646 aaKnown RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 MAOBP27338 520 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 FKBP1BP68106 108 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 IFIT5Q13325 482 aaKnown RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 POU4F3Q15319 338 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 TAF1CQ15572 869 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 CCDC85BQ15834 202 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 TSNAXIP1Q2TAA8 658 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 CCDC57Q2TAC2 916 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 TWISTNBQ3B726 338 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 ANGEL2Q5VTE6 544 aaKnown RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 KSR2Q6VAB6 950 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 ZNF804AQ7Z570 1209 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 SAPCD2Q86UD0 394 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 CELF1Q92879 486 aaKnown RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 LENG1Q96BZ8 264 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 NECAB3Q96P71 396 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 PSMG3-AS1Q96PY0 264 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 CORO1BQ9BR76 489 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 METTL22Q9BUU2 404 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 GGA3Q9NZ52 723 aa4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 C9orf78Q9NZ63 289 aaPredicted RBP4.72□□□□□ -1.65
HMGN1P11-201ENST00000508668 KDM3BQ7LBC6 1761 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 PI4KAP2A4QPH2 592 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 C1QTNF9BB2RNN3 333 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 ENC1O14682 589 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 ADAM23O75077 832 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 PAGE1O75459 146 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 ALX3O95076 343 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 CTSBP07858 339 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 TNNI2P48788 182 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 CTSWP56202 376 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 KIF23Q02241 960 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 NRG1Q02297 640 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 AP3B2Q13367 1082 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 DLGAP5Q15398 846 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 MAP3K11Q16584 847 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 KRT24Q2M2I5 525 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 SUPT20HL1Q3ZLR7 823 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 UBE3BQ7Z3V4 1068 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 CD163Q86VB7 1156 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 APOBEC3FQ8IUX4 373 aaKnown RBP4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 SULF2Q8IWU5 870 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 PI4KAP1Q8N8J0 262 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 TMEM87AQ8NBN3 555 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 ISCA1Q9BUE6 129 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 RUSC1Q9BVN2 902 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 COA1Q9GZY4 146 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 PRKRIP1Q9H875 184 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 AKTIPQ9H8T0 292 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 CBX8Q9HC52 389 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 MYOZ2Q9NPC6 264 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 CNNM1Q9NRU3 951 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 SAGE1Q9NXZ1 904 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 TMOD2Q9NZR1 351 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 HDAC5Q9UQL6 1122 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 LEMD3Q9Y2U8 911 aa4.71□□□□□ -1.66
HMGN1P11-201ENST00000508668 DLG5Q8TDM6 1919 aa4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 LOC100289279A0A1B0GTE1 492 aa4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 ADM5C9JUS6 153 aa4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 F8W735 103 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 PLIN1O60240 522 aa4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 EIF4EBP3O60516 100 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 VIL1P09327 827 aaKnown RBP4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 NME2P22392 152 aa4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 IREB2P48200 963 aaKnown RBP4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 CCT4P50991 539 aaKnown RBP4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 TNFAIP1Q13829 316 aa4.7□□□□□ -1.66
HMGN1P11-201ENST00000508668 PDE3AQ14432 1141 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms