RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 CLEC4DQ8WXI8 215 aa18.22■□□□□ 0.51
DDR1-264ENST00000508472 GNEQ9Y223 722 aaKnown RBP18.22■□□□□ 0.51
DDR1-264ENST00000508472 LAMA3Q16787 3333 aa18.22■□□□□ 0.51
DDR1-264ENST00000508472 TRIM43BA6NCK2 446 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 DYNC1LI2O43237 492 aaPredicted RBP18.21■□□□□ 0.51
DDR1-264ENST00000508472 ADCY6O43306 1168 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 SMPD1P17405 629 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 RPS6P62753 249 aaKnown RBP18.21■□□□□ 0.51
DDR1-264ENST00000508472 SH3RF1Q7Z6J0 888 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 DEFB123Q8N688 67 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 TRIM43Q96BQ3 446 aaPredicted RBP18.21■□□□□ 0.51
DDR1-264ENST00000508472 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 MRPL11Q9Y3B7 192 aaKnown RBP18.21■□□□□ 0.51
DDR1-264ENST00000508472 LCTP09848 1927 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 ASTN1O14525 1302 aa18.21■□□□□ 0.51
DDR1-264ENST00000508472 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
DDR1-264ENST00000508472 NKRFO15226 690 aaKnown RBP eCLIP18.2■□□□□ 0.5
DDR1-264ENST00000508472 CPT1AP50416 773 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 FPGSQ05932 587 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 FAAP100Q0VG06 881 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 DUSP28Q4G0W2 176 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 TAPT1Q6NXT6 567 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 FBXO11Q86XK2 927 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 ADGRF4Q8IZF3 695 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
DDR1-264ENST00000508472 TIMP1P01033 207 aa18.19■□□□□ 0.5
DDR1-264ENST00000508472 CDK7P50613 346 aa18.19■□□□□ 0.5
DDR1-264ENST00000508472 BEX3Q00994 111 aa18.19■□□□□ 0.5
DDR1-264ENST00000508472 SCFD2Q8WU76 684 aa18.19■□□□□ 0.5
DDR1-264ENST00000508472 GPHNQ9NQX3 736 aaPredicted RBP18.19■□□□□ 0.5
DDR1-264ENST00000508472 PDGFCQ9NRA1 345 aa18.19■□□□□ 0.5
DDR1-264ENST00000508472 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
DDR1-264ENST00000508472 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
DDR1-264ENST00000508472 SGSM2O43147 1006 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 SHHQ15465 462 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 FAM109BQ6ICB4 259 aaPredicted RBP18.18■□□□□ 0.5
DDR1-264ENST00000508472 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 TMEM199Q8N511 208 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 PURBQ96QR8 312 aaKnown RBP18.18■□□□□ 0.5
DDR1-264ENST00000508472 AMNQ9BXJ7 453 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
DDR1-264ENST00000508472 RBM47A0AV96 593 aaKnown RBP18.17■□□□□ 0.5
DDR1-264ENST00000508472 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 CTAGE5O15320 804 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 KPNA6O60684 536 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 CYP21A2P08686 494 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 ITGA7Q13683 1181 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 WTAPQ15007 396 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 SEC23AQ15436 765 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 QRICH1Q2TAL8 776 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 NSUN6Q8TEA1 469 aaKnown RBP18.17■□□□□ 0.5
DDR1-264ENST00000508472 IWS1Q96ST2 819 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 IL25Q9H293 177 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 TBX21Q9UL17 535 aa18.17■□□□□ 0.5
DDR1-264ENST00000508472 E7EWF7 191 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 EDNRBP24530 442 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 PTH1RQ03431 593 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 PPIGQ13427 754 aaKnown RBP eCLIP18.16■□□□□ 0.56e-8■□□□□ 10.3
DDR1-264ENST00000508472 TTLL4Q14679 1199 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 ZNF697Q5TEC3 545 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 MFSD5Q6N075 450 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 CATIPQ7Z7H3 387 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 FAM126BQ8IXS8 530 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 SAMD3Q8N6K7 520 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 RNPC3Q96LT9 517 aaKnown RBP18.16■□□□□ 0.5
DDR1-264ENST00000508472 JMJD4Q9H9V9 463 aa18.16■□□□□ 0.5
DDR1-264ENST00000508472 MAP3K20Q9NYL2 800 aaKnown RBP18.16■□□□□ 0.5
DDR1-264ENST00000508472 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
DDR1-264ENST00000508472 SMAD3P84022 425 aaKnown RBP18.15■□□□□ 0.5
DDR1-264ENST00000508472 STXBP2Q15833 593 aa18.15■□□□□ 0.5
DDR1-264ENST00000508472 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
DDR1-264ENST00000508472 SLC43A3Q8NBI5 491 aa18.15■□□□□ 0.5
DDR1-264ENST00000508472 PALM3A6NDB9 673 aaPredicted RBP18.14■□□□□ 0.49
DDR1-264ENST00000508472 ZBTB5O15062 677 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 SUPT20HL2P0C7V6 817 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 TXNP10599 105 aaKnown RBP18.14■□□□□ 0.49
DDR1-264ENST00000508472 ITGB8P26012 769 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 TMEM67Q5HYA8 995 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 C9orf50Q5SZB4 431 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 ARHGEF16Q5VV41 709 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 RMDN3Q96TC7 470 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 MTG1Q9BT17 334 aaPredicted RBP18.14■□□□□ 0.49
DDR1-264ENST00000508472 MTA3Q9BTC8 594 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 MTMR10Q9NXD2 777 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 STXBP5LQ9Y2K9 1186 aa18.14■□□□□ 0.49
DDR1-264ENST00000508472 DDX49Q9Y6V7 483 aaKnown RBP18.14■□□□□ 0.49
DDR1-264ENST00000508472 CD4P01730 458 aa18.13■□□□□ 0.49
DDR1-264ENST00000508472 GRM4Q14833 912 aa18.13■□□□□ 0.49
DDR1-264ENST00000508472 PSRC1Q6PGN9 363 aaPredicted RBP18.13■□□□□ 0.49
DDR1-264ENST00000508472 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
DDR1-264ENST00000508472 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
DDR1-264ENST00000508472 STAG2Q8N3U4 1231 aa18.13■□□□□ 0.49
DDR1-264ENST00000508472 SYTL5Q8TDW5 730 aaPredicted RBP18.13■□□□□ 0.49
DDR1-264ENST00000508472 MTIF3Q9H2K0 278 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms