RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 NCOA5Q9HCD5 579 aaKnown RBP12.21□□□□□ -0.45
SKI-204ENST00000508416 MCM3APO60318 1980 aa12.21□□□□□ -0.46
SKI-204ENST00000508416 CNTNAP5Q8WYK1 1306 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 CFBP00751 764 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 STK3Q13188 491 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 MAMDC4Q6UXC1 1216 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 SLC30A10Q6XR72 485 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 FGD4Q96M96 766 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 MAF1Q9H063 256 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 ADD3Q9UEY8 706 aaKnown RBP12.2□□□□□ -0.46
SKI-204ENST00000508416 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
SKI-204ENST00000508416 KIAA0100Q14667 2235 aaKnown RBP12.2□□□□□ -0.46
SKI-204ENST00000508416 LCTP09848 1927 aa12.19□□□□□ -0.46
SKI-204ENST00000508416 NID2Q14112 1375 aa12.19□□□□□ -0.46
SKI-204ENST00000508416 OPLAHO14841 1288 aa12.19□□□□□ -0.46
SKI-204ENST00000508416 SNAI1O95863 264 aaPredicted RBP12.19□□□□□ -0.46
SKI-204ENST00000508416 CNGA1P29973 690 aa12.19□□□□□ -0.46
SKI-204ENST00000508416 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
SKI-204ENST00000508416 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
SKI-204ENST00000508416 MSL3Q8N5Y2 521 aaKnown RBP12.19□□□□□ -0.46
SKI-204ENST00000508416 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■□□ 19.1
SKI-204ENST00000508416 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
SKI-204ENST00000508416 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 ASB14A6NK59 587 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 GCOM1H8Y6P7 765 aaPredicted RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 CPLX1O14810 134 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 PRPF3O43395 683 aaKnown RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 GJB1P08034 283 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 HOXA13P31271 388 aaPredicted RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 NTRK3Q16288 839 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 HEATR3Q7Z4Q2 680 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 SAMD3Q8N6K7 520 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 TRPV1Q8NER1 839 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 SYTL5Q8TDW5 730 aaPredicted RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 GPKOWQ92917 476 aaPredicted RBP eCLIP12.18□□□□□ -0.46
SKI-204ENST00000508416 PHKBQ93100 1093 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 TBC1D32Q96NH3 1257 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 DEFB118Q96PH6 123 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 PAK6Q9NQU5 681 aaPredicted RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 MAP3K20Q9NYL2 800 aaKnown RBP12.18□□□□□ -0.46
SKI-204ENST00000508416 CNPY2Q9Y2B0 182 aa12.18□□□□□ -0.46
SKI-204ENST00000508416 ASTN1O14525 1302 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 SYNGAP1Q96PV0 1343 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 PFKFB2O60825 505 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 CYBAP13498 195 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 IFNAR1P17181 557 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
SKI-204ENST00000508416 HSD17B4P51659 736 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 GHRHRQ02643 423 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 RABEP1Q15276 862 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 ME3Q16798 604 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
SKI-204ENST00000508416 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 CPLX2Q6PUV4 134 aaKnown RBP12.17□□□□□ -0.46
SKI-204ENST00000508416 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 ABHD16BQ9H3Z7 469 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 PSTPIP2Q9H939 334 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
SKI-204ENST00000508416 NRBP1Q9UHY1 535 aa12.17□□□□□ -0.46
SKI-204ENST00000508416 DDX49Q9Y6V7 483 aaKnown RBP12.17□□□□□ -0.46
SKI-204ENST00000508416 LOC102724159A0A0B4J2E5 919 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 B4DLN1 442 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 SGPL1O95470 568 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 TFRCP02786 760 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 ZNF865P0CJ78 1059 aaPredicted RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 SCG2P13521 617 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 GJA8P48165 433 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 MRPL12P52815 198 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 NAPAP54920 295 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 SCRN1Q12765 414 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 ACVR2BQ13705 512 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 PWP2Q15269 919 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 PKN1Q16512 942 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 PFKFB3Q16875 520 aaPredicted RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 FCHSD1Q86WN1 690 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 NECAB1Q8N987 351 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 CUL5Q93034 780 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 MPHOSPH6Q99547 160 aaKnown RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 ZHX1Q9UKY1 873 aaPredicted RBP12.16□□□□□ -0.46
SKI-204ENST00000508416 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
SKI-204ENST00000508416 hCG_1984214I3L0E3 225 aa12.15□□□□□ -0.46
SKI-204ENST00000508416 STXBP3O00186 592 aa12.15□□□□□ -0.46
SKI-204ENST00000508416 SEPT4O43236 478 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms