RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 OTUD6BQ8N6M0 293 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 CNBD1Q8NA66 436 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 GREM2Q9H772 168 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 ZIM2Q9NZV7 527 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 DOCK2Q92608 1830 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 SERPINB2P05120 415 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 GRIA4P48058 902 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 TFCP2Q12800 502 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 FOXB2Q5VYV0 432 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 SMIM5Q71RC9 77 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 BTLAQ7Z6A9 289 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 ANKRD18AQ8IVF6 992 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 MPHOSPH8Q99549 860 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 ARPC5LQ9BPX5 153 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 ANKRD2Q9GZV1 360 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 BRMS1Q9HCU9 246 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 CNNM1Q9NRU3 951 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 BSDC1Q9NW68 430 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 POTEMA6NI47 508 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 XYLBO75191 536 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 ADH1AP07327 375 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 VEGFBP49765 207 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 LRRFIP1Q32MZ4 808 aaKnown RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 TTBK2Q6IQ55 1244 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 TMEM214Q6NUQ4 689 aaKnown RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 DTHD1Q6ZMT9 781 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 RNF180Q86T96 592 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 EAF2Q96CJ1 260 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 IL1RAPL2Q9NP60 686 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 ABI2Q9NYB9 513 aaPredicted RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 MAP3K20Q9NYL2 800 aaKnown RBP8.32□□□□□ -1.08
CLCN3-206ENST00000507875 AKAP11Q9UKA4 1901 aa8.32□□□□□ -1.08
CLCN3-206ENST00000507875 VGLL3A8MV65 326 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 POLRMTO00411 1230 aaKnown RBP8.31□□□□□ -1.08
CLCN3-206ENST00000507875 GSPT1P15170 499 aaKnown RBP8.31□□□□□ -1.08
CLCN3-206ENST00000507875 HOXA10P31260 410 aaPredicted RBP8.31□□□□□ -1.08
CLCN3-206ENST00000507875 TGFB2P61812 414 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 THSD4Q6ZMP0 1018 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 LRRC69Q6ZNQ3 347 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 NIM1KQ8IY84 436 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CNTNAP3BQ96NU0 1288 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CRAMP1Q96RY5 1269 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CNTNAP3Q9BZ76 1288 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 ASPSCR1Q9BZE9 553 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 SIL1Q9H173 461 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CFAP69A5D8W1 941 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 SIAH2O43255 324 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 RRP9O43818 475 aaKnown RBP8.31□□□□□ -1.08
CLCN3-206ENST00000507875 PDE8BO95263 885 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 UQCRFS1P1P0C7P4 283 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 SDSP20132 328 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 L1CAMP32004 1257 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 PUM3Q15397 648 aaKnown RBP8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CRY2Q49AN0 593 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 METTL24Q5JXM2 366 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 CCDC158Q5M9N0 1113 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 WDR78Q5VTH9 848 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 VGLL2Q8N8G2 317 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 LPIN2Q92539 896 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 RBM17Q96I25 401 aaKnown RBP8.31□□□□□ -1.08
CLCN3-206ENST00000507875 BRIP1Q9BX63 1249 aa8.31□□□□□ -1.08
CLCN3-206ENST00000507875 ST18O60284 1047 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 SLC5A1P13866 664 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 SPRED3Q2MJR0 410 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 RUFY2Q8WXA3 655 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 TCF12Q99081 682 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 ARNT2Q9HBZ2 717 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 RAD50Q92878 1312 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 A0A1B0GUL7 405 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 RNF223E7ERA6 249 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 NPHP1O15259 732 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 BBOX1O75936 387 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 FGFR2P21802 821 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 ARSDP51689 593 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 RPS8P62241 208 aaKnown RBP8.3□□□□□ -1.08
CLCN3-206ENST00000507875 LMNB2Q03252 620 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 ATP2B3Q16720 1220 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 LRRC24Q50LG9 513 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 KRT25Q7Z3Z0 450 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 SYNE4Q8N205 404 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 OTUD7AQ8TE49 926 aaPredicted RBP8.3□□□□□ -1.08
CLCN3-206ENST00000507875 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 HAUS7Q99871 368 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 FRMD4BQ9Y2L6 1034 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 TAF1P21675 1872 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 LTBP1Q14766 1721 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 MAST2Q6P0Q8 1798 aa8.3□□□□□ -1.08
CLCN3-206ENST00000507875 FAM86C2PA6NEL3 165 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 REC8O95072 547 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms