RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 KIF6Q6ZMV9 814 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 KRT25Q7Z3Z0 450 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 ZNF438Q7Z4V0 828 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 KIAA0825Q8IV33 1275 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 GLYCTKQ8IVS8 523 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 DTWD1Q8N5C7 304 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 COA7Q96BR5 231 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 MFSD14AQ96MC6 490 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 NACC1Q96RE7 527 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 PBX4Q9BYU1 374 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 VEZTQ9HBM0 779 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 SRA1Q9HD15 236 aaKnown RBP7.08□□□□□ -1.28
VEGFC-201ENST00000507638 COG5Q9UP83 839 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 ATP11BQ9Y2G3 1177 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 STARD13Q9Y3M8 1113 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 PCDHAC2Q9Y5I4 1007 aa7.08□□□□□ -1.28
VEGFC-201ENST00000507638 PRRC2BQ5JSZ5 2229 aaKnown RBP7.08□□□□□ -1.28
VEGFC-201ENST00000507638 CHD6Q8TD26 2715 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 FASNP49327 2511 aaKnown RBP7.07□□□□□ -1.28
VEGFC-201ENST00000507638 ZNF804BA4D1E1 1349 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 CYP2C8P10632 490 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 MMP14P50281 582 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 RAC1P63000 192 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 IRX6P78412 446 aaPredicted RBP7.07□□□□□ -1.28
VEGFC-201ENST00000507638 TCF15Q12870 199 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 TRIP4Q15650 581 aaPredicted RBP7.07□□□□□ -1.28
VEGFC-201ENST00000507638 PSAPL1Q6NUJ1 521 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 ELMSAN1Q6PJG2 1045 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 ERO1BQ86YB8 467 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 FAM9BQ8IZU0 186 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 MUC3BQ9H195 1237 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 JPH1Q9HDC5 661 aaPredicted RBP7.07□□□□□ -1.28
VEGFC-201ENST00000507638 PODXL2Q9NZ53 605 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 RRP7AQ9Y3A4 280 aaKnown RBP7.07□□□□□ -1.28
VEGFC-201ENST00000507638 MAST2Q6P0Q8 1798 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 RIF1Q5UIP0 2472 aaKnown RBP7.07□□□□□ -1.28
VEGFC-201ENST00000507638 AK9Q5TCS8 1911 aa7.07□□□□□ -1.28
VEGFC-201ENST00000507638 MYO3BQ8WXR4 1341 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 ZBTB39O15060 712 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 MMP20O60882 483 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 ALBP02768 609 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 PDGFAP04085 211 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 HMOX1P09601 288 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 GSK3AP49840 483 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 DNM1Q05193 864 aaKnown RBP7.06□□□□□ -1.28
VEGFC-201ENST00000507638 KCNA1Q09470 495 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 ST3GAL2Q16842 350 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.06□□□□□ -1.28
VEGFC-201ENST00000507638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.06□□□□□ -1.28
VEGFC-201ENST00000507638 EDEM1Q92611 657 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 TESK2Q96S53 571 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 FAM186AA6NE01 2351 aa7.06□□□□□ -1.28
VEGFC-201ENST00000507638 SETXQ7Z333 2677 aaKnown RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 TRIM43BA6NCK2 446 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 NDUFB5O43674 189 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 MYL6BP14649 208 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 EIF2AK2P19525 551 aaKnown RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 RPS8P62241 208 aaKnown RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 TRIM28Q13263 835 aaKnown RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 STRIP1Q5VSL9 837 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 ASCL5Q7RTU5 278 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 MAP4K3Q8IVH8 894 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 ZKSCAN4Q969J2 545 aaPredicted RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 TRIM43Q96BQ3 446 aaPredicted RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 PRMT6Q96LA8 375 aaPredicted RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 PLVAPQ9BX97 442 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 SNCAIPQ9Y6H5 919 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 TRANK1O15050 2925 aa7.05□□□□□ -1.28
VEGFC-201ENST00000507638 SIPA1L3O60292 1781 aaPredicted RBP7.05□□□□□ -1.28
VEGFC-201ENST00000507638 ECM29Q5VYK3 1845 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 DCXO43602 365 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 MYO1BO43795 1136 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 EIF4EBP3O60516 100 aaPredicted RBP7.04□□□□□ -1.28
VEGFC-201ENST00000507638 KIF4AO95239 1232 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 NID1P14543 1247 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 CPB1P15086 417 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 IL13P35225 146 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 SCNN1AP37088 669 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 PPIL2Q13356 520 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 FAM26DQ5JW98 314 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 TTLL5Q6EMB2 1281 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 DGLUCYQ7Z3D6 616 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 FAM178BQ8IXR5 827 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 SNX29Q8TEQ0 813 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 ATOH1Q92858 354 aaPredicted RBP7.04□□□□□ -1.28
VEGFC-201ENST00000507638 ZNF428Q96B54 188 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 PARK7Q99497 189 aaKnown RBP7.04□□□□□ -1.28
VEGFC-201ENST00000507638 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 TRMT112Q9UI30 125 aaKnown RBP7.04□□□□□ -1.28
VEGFC-201ENST00000507638 BRPF3Q9ULD4 1205 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 USP20Q9Y2K6 914 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 CEMIPQ8WUJ3 1361 aa7.04□□□□□ -1.28
VEGFC-201ENST00000507638 GPR179Q6PRD1 2367 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 PLXNA3P51805 1871 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 H3BRB1 525 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 SMNDC1O75940 238 aaKnown RBP eCLIP7.03□□□□□ -1.28
VEGFC-201ENST00000507638 NEFMP07197 916 aa7.03□□□□□ -1.28
VEGFC-201ENST00000507638 AFF1P51825 1210 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms