RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SBK1Q52WX2 424 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 RPAP2Q8IXW5 612 aaPredicted RBP16.57■□□□□ 0.24
DDR1-260ENST00000507533 LRRC47Q8N1G4 583 aaKnown RBP16.57■□□□□ 0.24
DDR1-260ENST00000507533 GMCL1P1Q8NEA9 526 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 FBXL18Q96ME1 805 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
DDR1-260ENST00000507533 IL9P15248 144 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 CPT1AP50416 773 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 BFSP2Q13515 415 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
DDR1-260ENST00000507533 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
DDR1-260ENST00000507533 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 WDR11Q9BZH6 1224 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 KCNH6Q9H252 994 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 SYNPO2Q9UMS6 1093 aa16.56■□□□□ 0.24
DDR1-260ENST00000507533 TTLL1O95922 423 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 STAT2P52630 851 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 WDR5P61964 334 aaKnown RBP16.55■□□□□ 0.24
DDR1-260ENST00000507533 IKQ13123 557 aaPredicted RBP16.55■□□□□ 0.24
DDR1-260ENST00000507533 PTCRAQ6ISU1 281 aaPredicted RBP16.55■□□□□ 0.24
DDR1-260ENST00000507533 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 OR6J1Q8NGC5 347 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 MORC4Q8TE76 937 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 CHURC1Q8WUH1 139 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 PURBQ96QR8 312 aaKnown RBP16.55■□□□□ 0.24
DDR1-260ENST00000507533 HAUS7Q99871 368 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 SCN5AQ14524 2016 aa16.55■□□□□ 0.24
DDR1-260ENST00000507533 GREB1LQ9C091 1923 aaPredicted RBP16.55■□□□□ 0.24
DDR1-260ENST00000507533 DCXO43602 365 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 PRDM1O75626 825 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 RLBP1P12271 317 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 ATP5JP18859 108 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 MUM1L1Q5H9M0 696 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 NFRKBQ6P4R8 1299 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 NSMFQ6X4W1 530 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
DDR1-260ENST00000507533 STRBPQ96SI9 672 aaKnown RBP16.54■□□□□ 0.24
DDR1-260ENST00000507533 NOD1Q9Y239 953 aa16.54■□□□□ 0.24
DDR1-260ENST00000507533 GRXCR2A6NFK2 248 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 SNAP25P60880 206 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 ERVK-21P61565 698 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 PTPN11Q06124 597 aaPredicted RBP16.53■□□□□ 0.24
DDR1-260ENST00000507533 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
DDR1-260ENST00000507533 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 CHMP4CQ96CF2 233 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 RAD9AQ99638 391 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 ZNF287Q9HBT7 754 aa16.53■□□□□ 0.24
DDR1-260ENST00000507533 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
DDR1-260ENST00000507533 POTEB3A0JP26 581 aa16.52■□□□□ 0.24
DDR1-260ENST00000507533 DEFB103AP81534 67 aa16.52■□□□□ 0.24
DDR1-260ENST00000507533 LRRFIP1Q32MZ4 808 aaKnown RBP16.52■□□□□ 0.24
DDR1-260ENST00000507533 PUS10Q3MIT2 529 aaKnown RBP16.52■□□□□ 0.24
DDR1-260ENST00000507533 POTEBQ6S5H4 581 aa16.52■□□□□ 0.24
DDR1-260ENST00000507533 RBM47A0AV96 593 aaKnown RBP16.51■□□□□ 0.23
DDR1-260ENST00000507533 LINC01553A4QN01 128 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 KPNA6O60684 536 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 GJB5O95377 273 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 SLC1A4P43007 532 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 AFAP1L1Q8TED9 768 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
DDR1-260ENST00000507533 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
DDR1-260ENST00000507533 WDFY4Q6ZS81 3184 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 RAD50Q92878 1312 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 MCCP23508 829 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
DDR1-260ENST00000507533 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
DDR1-260ENST00000507533 GPNMBQ14956 572 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 PTGISQ16647 500 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 CNKSR3Q6P9H4 555 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 KCTD1Q719H9 257 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 NEDD1Q8NHV4 660 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 CAGE1Q8TC20 777 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 CRBNQ96SW2 442 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
DDR1-260ENST00000507533 A6NJR5 290 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 H3BQ06 376 aaPredicted RBP16.49■□□□□ 0.23
DDR1-260ENST00000507533 PLA2G6O60733 806 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 TSPY3P0CV98 308 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 TSPY8P0CW00 308 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 NEK9Q8TD19 979 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 BRWD1Q9NSI6 2320 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 PRR12Q9ULL5 1215 aa16.49■□□□□ 0.23
DDR1-260ENST00000507533 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 ABHD14A-ACY1A0A1B0GW23 586 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDR1-260ENST00000507533 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 SELPP16109 830 aa16.48■□□□□ 0.23
DDR1-260ENST00000507533 TDO2P48775 406 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms