RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 ALPK3Q96L96 1907 aa16.43■□□□□ 0.22
CCHCR1-222ENST00000507459 SYNRGQ9UMZ2 1314 aa16.43■□□□□ 0.22
CCHCR1-222ENST00000507459 PPP1R11O60927 126 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 ADAMTS4O75173 837 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 REC8O95072 547 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 KIF5BP33176 963 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 IRX5P78411 483 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 TNFAIP2Q03169 654 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 KRT32Q14532 448 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 DHX32Q7L7V1 743 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 LCTP09848 1927 aa16.42■□□□□ 0.22
CCHCR1-222ENST00000507459 MYADML2A6NDP7 307 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 CFBP00751 764 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 C6orf222P0C671 652 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 SYN1P17600 705 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 PDE4DQ08499 809 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 SYTL5Q8TDW5 730 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 MORC4Q8TE76 937 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 TAAR1Q96RJ0 339 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 SPC25Q9HBM1 224 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
CCHCR1-222ENST00000507459 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 CALM1P0DP23 149 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 CALM2P0DP24 149 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 CALM3P0DP25 149 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 CPA1P15085 419 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 PTGS1P23219 599 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 HSPA4P34932 840 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 FGD1P98174 961 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 TAPT1Q6NXT6 567 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 SLC39A5Q6ZMH5 540 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 MICU3Q86XE3 530 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 DNERQ8NFT8 737 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 COL20A1Q9P218 1284 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 COLQQ9Y215 455 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 ATP11BQ9Y2G3 1177 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
CCHCR1-222ENST00000507459 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 B4DLN1 442 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 DYNC1LI2O43237 492 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 SMPD1P17405 629 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 GNAQP50148 359 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 RTP1P59025 263 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 KCNA10Q16322 511 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 GNASQ5JWF2 1037 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 TMEM63BQ5T3F8 832 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 SGMS1Q86VZ5 419 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 RMDN3Q96TC7 470 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 LZTS2Q9BRK4 669 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 PCDH10Q9P2E7 1040 aa16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 NAP1L2Q9ULW6 460 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-222ENST00000507459 A0A1W2PQ45 241 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 A0A1W2PQY0 241 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 OPLAHO14841 1288 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 HOXA13P31271 388 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 ACLYP53396 1101 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 GJA9P57773 515 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 BEX3Q00994 111 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 TRAF1Q13077 416 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 ARHGEF16Q5VV41 709 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 TLK2Q86UE8 772 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 NSUN6Q8TEA1 469 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 KCNB2Q92953 911 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 TSEN34Q9BSV6 310 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 MAF1Q9H063 256 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 AP5M1Q9H0R1 490 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 GNEQ9Y223 722 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 DNAH12Q6ZR08 3092 aa16.38■□□□□ 0.21
CCHCR1-222ENST00000507459 ASGR1P07306 291 aa16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 EIF2AK2P19525 551 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 EDNRBP24530 442 aa16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 TRIM60Q495X7 471 aa16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 PCSK9Q8NBP7 692 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-222ENST00000507459 STARD7Q9NQZ5 370 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms