RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BRAPQ7Z569 592 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 FGD2Q7Z6J4 655 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 PPIL6Q8IXY8 311 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 ASIC4Q96FT7 647 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 PTCHD1Q96NR3 888 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 IPO9Q96P70 1041 aaKnown RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 CDADC1Q9BWV3 514 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 CARS2Q9HA77 564 aaKnown RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 BSDC1Q9NW68 430 aaPredicted RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 ERVK13-1Q9NX77 482 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 PLAAQ9Y263 795 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 A0A087X0B3 334 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 MSCO60682 206 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 CLSTN1O94985 981 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 GABREP78334 506 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 IKZF1Q13422 519 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 INF2Q27J81 1249 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 WAPLQ7Z5K2 1190 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 DTX1Q86Y01 620 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 NIM1KQ8IY84 436 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 PTPRN2Q92932 1015 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 MFSD3Q96ES6 412 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 MISP3Q96FF7 219 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 PHF20Q9BVI0 1012 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 IFT57Q9NWB7 429 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 NDOR1Q9UHB4 597 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 SFMBT1Q9UHJ3 866 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 PRKAB1Q9Y478 270 aa5.01□□□□□ -1.61
LSM6-205ENST00000507449 SSU72P8A0A1W2PR75 194 aa5□□□□□ -1.61
LSM6-205ENST00000507449 MEFVO15553 781 aaPredicted RBP5□□□□□ -1.61
LSM6-205ENST00000507449 ADAMTS4O75173 837 aa5□□□□□ -1.61
LSM6-205ENST00000507449 RASGRP1O95267 797 aa5□□□□□ -1.61
LSM6-205ENST00000507449 VIL1P09327 827 aaKnown RBP5□□□□□ -1.61
LSM6-205ENST00000507449 RPL10P27635 214 aaKnown RBP5□□□□□ -1.61
LSM6-205ENST00000507449 ZNF460Q14592 562 aa5□□□□□ -1.61
LSM6-205ENST00000507449 RALGPS1Q5JS13 557 aa5□□□□□ -1.61
LSM6-205ENST00000507449 E4F1Q66K89 784 aaPredicted RBP5□□□□□ -1.61
LSM6-205ENST00000507449 MAMDC2Q7Z304 686 aaPredicted RBP5□□□□□ -1.61
LSM6-205ENST00000507449 FILIP1Q7Z7B0 1213 aa5□□□□□ -1.61
LSM6-205ENST00000507449 THNSL2Q86YJ6 484 aa5□□□□□ -1.61
LSM6-205ENST00000507449 CPNE8Q86YQ8 564 aa5□□□□□ -1.61
LSM6-205ENST00000507449 KSR1Q8IVT5 923 aa5□□□□□ -1.61
LSM6-205ENST00000507449 RCBTB1Q8NDN9 531 aa5□□□□□ -1.61
LSM6-205ENST00000507449 DCAF4Q8WV16 495 aa5□□□□□ -1.61
LSM6-205ENST00000507449 LINC01599Q8WXQ3 324 aa5□□□□□ -1.61
LSM6-205ENST00000507449 FCRL2Q96LA5 508 aaPredicted RBP5□□□□□ -1.61
LSM6-205ENST00000507449 MMP19Q99542 508 aa5□□□□□ -1.61
LSM6-205ENST00000507449 SLKQ9H2G2 1235 aaPredicted RBP5□□□□□ -1.61
LSM6-205ENST00000507449 CCDC39Q9UFE4 941 aa5□□□□□ -1.61
LSM6-205ENST00000507449 FBXL7Q9UJT9 491 aa5□□□□□ -1.61
LSM6-205ENST00000507449 GSG1L2A8MUP6 293 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 DNAJC6O75061 913 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 EFEMP2O95967 443 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 WNT11O96014 354 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 POU3F3P20264 500 aaPredicted RBP4.99□□□□□ -1.61
LSM6-205ENST00000507449 LTBRP36941 435 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 KCNAB2Q13303 367 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 STK11IPQ8N1F8 1099 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 MAP6Q96JE9 813 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 HHIPL1Q96JK4 782 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 PUS7Q96PZ0 661 aaKnown RBP4.99□□□□□ -1.61
LSM6-205ENST00000507449 TARS2Q9BW92 718 aaKnown RBP4.99□□□□□ -1.61
LSM6-205ENST00000507449 FAM126AQ9BYI3 521 aaPredicted RBP4.99□□□□□ -1.61
LSM6-205ENST00000507449 ADAMTS10Q9H324 1103 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 SPC25Q9HBM1 224 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 PRDM7Q9NQW5 492 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 GPR27Q9NS67 375 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 LMCD1Q9NZU5 365 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 SLC5A6Q9Y289 635 aa4.99□□□□□ -1.61
LSM6-205ENST00000507449 NPHP3-ACAD11A0A0J9YXS1 232 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 TCRBV16S1A1N1A0A5B0 115 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 C7orf72A4D263 438 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 NOTOA8MTQ0 251 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 EFCAB14O75071 495 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 CRTAMO95727 393 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 ZGLP1P0C6A0 271 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 KCNA6P17658 529 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 PAMP19021 973 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 AMPD3Q01432 767 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 ZP2Q05996 745 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 LAPTM5Q13571 262 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 PTPROQ16827 1216 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 RNF187Q5TA31 235 aaPredicted RBP4.98□□□□□ -1.61
LSM6-205ENST00000507449 ABHD17CQ6PCB6 329 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
LSM6-205ENST00000507449 CYP2R1Q6VVX0 501 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 SLCO6A1Q86UG4 719 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 VSIG10LQ86VR7 867 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 DPF3Q92784 378 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 DIO2Q92813 273 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 CDIP1Q9H305 208 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 SP110Q9HB58 689 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 PAK6Q9NQU5 681 aaPredicted RBP4.98□□□□□ -1.61
LSM6-205ENST00000507449 C19orf73Q9NVV2 129 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 SLAMF8Q9P0V8 285 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 PPARGC1AQ9UBK2 798 aaKnown RBP4.98□□□□□ -1.61
LSM6-205ENST00000507449 PCDHA9Q9Y5H5 950 aa4.98□□□□□ -1.61
LSM6-205ENST00000507449 TNPO3Q9Y5L0 923 aaKnown RBP4.98□□□□□ -1.61
LSM6-205ENST00000507449 PPP1R11O60927 126 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms