RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 AKR1A1P14550 325 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 MRPL12P52815 198 aaKnown RBP22.38■■□□□ 1.17
LMNA-221ENST00000506981 RCAN1P53805 252 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 PWP2Q15269 919 aaKnown RBP22.38■■□□□ 1.17
LMNA-221ENST00000506981 SLC35G1Q2M3R5 365 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 TMTC3Q6ZXV5 915 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 TM6SF1Q9BZW5 370 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 BRPF3Q9ULD4 1205 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 RARBP10826 455 aa22.37■■□□□ 1.17
LMNA-221ENST00000506981 ALDH5A1P51649 535 aaPredicted RBP22.37■■□□□ 1.17
LMNA-221ENST00000506981 APOBRQ0VD83 1088 aa22.37■■□□□ 1.17
LMNA-221ENST00000506981 ACVR2BQ13705 512 aa22.37■■□□□ 1.17
LMNA-221ENST00000506981 LHX8Q68G74 356 aa22.37■■□□□ 1.17
LMNA-221ENST00000506981 SRBD1Q8N5C6 995 aaKnown RBP22.37■■□□□ 1.17
LMNA-221ENST00000506981 ZSWIM6Q9HCJ5 1215 aa22.37■■□□□ 1.17
LMNA-221ENST00000506981 FAM184BQ9ULE4 1060 aa22.37■■□□□ 1.17
LMNA-221ENST00000506981 PPP1R11O60927 126 aaPredicted RBP22.36■■□□□ 1.17
LMNA-221ENST00000506981 CFBP00751 764 aa22.36■■□□□ 1.17
LMNA-221ENST00000506981 ZNF865P0CJ78 1059 aaPredicted RBP22.36■■□□□ 1.17
LMNA-221ENST00000506981 METAP2P50579 478 aaKnown RBP eCLIP22.36■■□□□ 1.17
LMNA-221ENST00000506981 ANAPC15P60006 121 aa22.36■■□□□ 1.17
LMNA-221ENST00000506981 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
LMNA-221ENST00000506981 NECAB2Q7Z6G3 386 aa22.36■■□□□ 1.17
LMNA-221ENST00000506981 FBXL16Q8N461 479 aa22.36■■□□□ 1.17
LMNA-221ENST00000506981 DNERQ8NFT8 737 aa22.36■■□□□ 1.17
LMNA-221ENST00000506981 ALPK3Q96L96 1907 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 CCDC196A0A1B0GTZ2 297 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 PPP2R5BQ15173 497 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 CMTR1Q8N1G2 835 aaKnown RBP22.35■■□□□ 1.17
LMNA-221ENST00000506981 CCDC82Q8N4S0 544 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 SAMD3Q8N6K7 520 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 ARRDC4Q8NCT1 418 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 PURBQ96QR8 312 aaKnown RBP22.35■■□□□ 1.17
LMNA-221ENST00000506981 HTATIP2Q9BUP3 242 aa22.35■■□□□ 1.17
LMNA-221ENST00000506981 UPF3BQ9BZI7 483 aaKnown RBP22.35■■□□□ 1.17
LMNA-221ENST00000506981 ASTN1O14525 1302 aa22.34■■□□□ 1.17
LMNA-221ENST00000506981 MYCNP04198 464 aaPredicted RBP22.34■■□□□ 1.17
LMNA-221ENST00000506981 PDE4DQ08499 809 aa22.34■■□□□ 1.17
LMNA-221ENST00000506981 PAWRQ96IZ0 340 aaKnown RBP22.34■■□□□ 1.17
LMNA-221ENST00000506981 AGXT2Q9BYV1 514 aa22.34■■□□□ 1.17
LMNA-221ENST00000506981 XPNPEP3Q9NQH7 507 aa22.34■■□□□ 1.17
LMNA-221ENST00000506981 MAP3K20Q9NYL2 800 aaKnown RBP22.34■■□□□ 1.17
LMNA-221ENST00000506981 BRCA2P51587 3418 aa22.34■■□□□ 1.17
LMNA-221ENST00000506981 KBTBD13C9JR72 458 aa22.33■■□□□ 1.17
LMNA-221ENST00000506981 SYTL5Q8TDW5 730 aaPredicted RBP22.33■■□□□ 1.17
LMNA-221ENST00000506981 VTA1Q9NP79 307 aa22.33■■□□□ 1.17
LMNA-221ENST00000506981 CNTNAP5Q8WYK1 1306 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 CCDC144BQ3MJ40 725 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 EEPD1Q7L9B9 569 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 UBE2Q1Q7Z7E8 422 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 MORC4Q8TE76 937 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 NSUN6Q8TEA1 469 aaKnown RBP22.32■■□□□ 1.16
LMNA-221ENST00000506981 DIS3LQ8TF46 1054 aaKnown RBP22.32■■□□□ 1.16
LMNA-221ENST00000506981 TBC1D5Q92609 795 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 C11orf49Q9H6J7 331 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 PDRG1Q9NUG6 133 aa22.32■■□□□ 1.16
LMNA-221ENST00000506981 NID2Q14112 1375 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 GCOM1H8Y6P7 765 aaPredicted RBP22.31■■□□□ 1.16
LMNA-221ENST00000506981 DNM1LO00429 736 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 POLR2MP0CAP2 368 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 HSD17B4P51659 736 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 ARHGEF16Q5VV41 709 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 NOL8Q76FK4 1167 aaKnown RBP22.31■■□□□ 1.16
LMNA-221ENST00000506981 RNF180Q86T96 592 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 FBXO16Q8IX29 292 aaPredicted RBP22.31■■□□□ 1.16
LMNA-221ENST00000506981 CUL5Q93034 780 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 RMDN3Q96TC7 470 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 SPC25Q9HBM1 224 aa22.31■■□□□ 1.16
LMNA-221ENST00000506981 MYH7BA7E2Y1 1941 aa22.3■■□□□ 1.16
LMNA-221ENST00000506981 OPLAHO14841 1288 aa22.3■■□□□ 1.16
LMNA-221ENST00000506981 DUSP11O75319 330 aaKnown RBP22.3■■□□□ 1.16
LMNA-221ENST00000506981 GHRHRQ02643 423 aa22.3■■□□□ 1.16
LMNA-221ENST00000506981 C8orf34Q49A92 452 aa22.3■■□□□ 1.16
LMNA-221ENST00000506981 TAAR1Q96RJ0 339 aa22.3■■□□□ 1.16
LMNA-221ENST00000506981 KATNBL1Q9H079 304 aa22.3■■□□□ 1.16
LMNA-221ENST00000506981 DDX49Q9Y6V7 483 aaKnown RBP22.3■■□□□ 1.16
LMNA-221ENST00000506981 hCG_1642624A0A1W2PR95 340 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 SEC24BO95487 1268 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 CDC27P30260 824 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 TNFAIP2Q03169 654 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 TOB2Q14106 344 aaPredicted RBP22.29■■□□□ 1.16
LMNA-221ENST00000506981 GJC2Q5T442 439 aaPredicted RBP22.29■■□□□ 1.16
LMNA-221ENST00000506981 HEATR3Q7Z4Q2 680 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 LENG1Q96BZ8 264 aaPredicted RBP22.29■■□□□ 1.16
LMNA-221ENST00000506981 IWS1Q96ST2 819 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 COL20A1Q9P218 1284 aa22.29■■□□□ 1.16
LMNA-221ENST00000506981 TNRC18O15417 2968 aaPredicted RBP22.28■■□□□ 1.16
LMNA-221ENST00000506981 PGK1P00558 417 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 EIF2AK2P19525 551 aaKnown RBP22.28■■□□□ 1.16
LMNA-221ENST00000506981 EDNRBP24530 442 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 HOXA13P31271 388 aaPredicted RBP22.28■■□□□ 1.16
LMNA-221ENST00000506981 ADCYAP1R1P41586 468 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 MNX1P50219 401 aaPredicted RBP22.28■■□□□ 1.16
LMNA-221ENST00000506981 LRRC41Q15345 812 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 IQSEC1Q6DN90 963 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 SMARCC2Q8TAQ2 1214 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 DPF3Q92784 378 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 RBM27Q9P2N5 1060 aaKnown RBP22.28■■□□□ 1.16
LMNA-221ENST00000506981 SYNRGQ9UMZ2 1314 aa22.28■■□□□ 1.16
LMNA-221ENST00000506981 hCG_1984214I3L0E3 225 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 444.8 ms