RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CALCRLQ16602 461 aa13.77□□□□□ -0.2
LIN54-206ENST00000506560 TRIML1Q8N9V2 468 aa13.77□□□□□ -0.2
LIN54-206ENST00000506560 HAS1Q92839 578 aa13.77□□□□□ -0.2
LIN54-206ENST00000506560 GSDMAQ96QA5 445 aa13.77□□□□□ -0.2
LIN54-206ENST00000506560 CCSER1Q9C0I3 900 aa13.77□□□□□ -0.2
LIN54-206ENST00000506560 CTNND2Q9UQB3 1225 aa13.77□□□□□ -0.2
LIN54-206ENST00000506560 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.2
LIN54-206ENST00000506560 GTPBP6O43824 516 aaPredicted RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 TXLNAP40222 546 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 SYDE2Q5VT97 1194 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 TBC1D5Q92609 795 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 FBXO28Q9NVF7 368 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 USP27XA6NNY8 438 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 RPN1P04843 607 aaKnown RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 CCZ1BP86790 482 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 CCZ1P86791 482 aaPredicted RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 RASA3Q14644 834 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 PRAMEF18Q5VWM3 479 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
LIN54-206ENST00000506560 IGSF22Q8N9C0 903 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 HPS3Q969F9 1004 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 GMCL1Q96IK5 515 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 PRR12Q9ULL5 1215 aa13.77□□□□□ -0.21
LIN54-206ENST00000506560 LAD1O00515 517 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 KLRC4O43908 158 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 ECM1Q16610 540 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 KCNK18Q7Z418 384 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 PTGER2P43116 358 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
LIN54-206ENST00000506560 MRPL12P52815 198 aaKnown RBP13.76□□□□□ -0.21
LIN54-206ENST00000506560 TPM4P67936 248 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 GRB10Q13322 594 aa13.76□□□□□ -0.21
LIN54-206ENST00000506560 ZFP91Q96JP5 570 aaPredicted RBP13.76□□□□□ -0.21
LIN54-206ENST00000506560 SYNRGQ9UMZ2 1314 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
LIN54-206ENST00000506560 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 MTMR14Q8NCE2 650 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 ANO3Q9BYT9 981 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 SPTLC3Q9NUV7 552 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 KBTBD4Q9NVX7 518 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 DDX25Q9UHL0 483 aaKnown RBP13.75□□□□□ -0.21
LIN54-206ENST00000506560 PRCPP42785 496 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 HSP90AA2PQ14568 343 aaPredicted RBP13.75□□□□□ -0.21
LIN54-206ENST00000506560 CCDC174Q6PII3 467 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 APTXQ7Z2E3 356 aaKnown RBP13.75□□□□□ -0.21
LIN54-206ENST00000506560 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 TEPSINQ96N21 525 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 TMX2Q9Y320 296 aa13.75□□□□□ -0.21
LIN54-206ENST00000506560 TEX33O43247 280 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 TPM3P06753 285 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 SKILP12757 684 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 CDK11BP21127 795 aaKnown RBP13.74□□□□□ -0.21
LIN54-206ENST00000506560 CAP2P40123 477 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 CYP2W1Q8TAV3 490 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 BLOC1S4Q9NUP1 217 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 STAT3P40763 770 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
LIN54-206ENST00000506560 KIFC2Q96AC6 838 aa13.74□□□□□ -0.21
LIN54-206ENST00000506560 MYO1BO43795 1136 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 FCER1AP12319 257 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
LIN54-206ENST00000506560 MCM6Q14566 821 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
LIN54-206ENST00000506560 FAM83AQ86UY5 434 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 PHF20L1A8MW92 1017 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 STAT2P52630 851 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 FCHSD1Q86WN1 690 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
LIN54-206ENST00000506560 UBXN2AP68543 259 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 ZNF658Q5TYW1 1059 aaPredicted RBP13.72□□□□□ -0.21
LIN54-206ENST00000506560 SPATA1Q5VX52 437 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 VSTM4Q8IW00 320 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 NELFBQ8WX92 580 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 AK8Q96MA6 479 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 TRIM9Q9C026 710 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 TRMT1Q9NXH9 659 aaKnown RBP13.72□□□□□ -0.21
LIN54-206ENST00000506560 FAM86B1E9PN63 330 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 FAM86B2P0C5J1 330 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIN54-206ENST00000506560 FKBP1CQ5VVH2 108 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms