RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 FBXO18Q8NFZ0 1043 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 CHURC1Q8WUH1 139 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 WASF1Q92558 559 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 RNF26Q9BY78 433 aaPredicted RBP15.99■□□□□ 0.15
SERF1B-204ENST00000506542 MROH8Q9H579 483 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 CTDP1Q9Y5B0 961 aaPredicted RBP15.99■□□□□ 0.15
SERF1B-204ENST00000506542 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
SERF1B-204ENST00000506542 LCTP09848 1927 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 HMGCRP04035 888 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
SERF1B-204ENST00000506542 KIF5BP33176 963 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 CACNB2Q08289 660 aaPredicted RBP15.99■□□□□ 0.15
SERF1B-204ENST00000506542 RESTQ13127 1097 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 GRM4Q14833 912 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 DPP9Q86TI2 863 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 FAM160B2Q86V87 743 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 MMP19Q99542 508 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 ZSCAN16Q9H4T2 348 aaPredicted RBP15.99■□□□□ 0.15
SERF1B-204ENST00000506542 PLEKHA8P1O95397 391 aa15.98■□□□□ 0.15
SERF1B-204ENST00000506542 DEXIO95424 95 aa15.98■□□□□ 0.15
SERF1B-204ENST00000506542 FCER1AP12319 257 aa15.98■□□□□ 0.15
SERF1B-204ENST00000506542 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
SERF1B-204ENST00000506542 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
SERF1B-204ENST00000506542 MUM1L1Q5H9M0 696 aa15.98■□□□□ 0.15
SERF1B-204ENST00000506542 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
SERF1B-204ENST00000506542 CMTR1Q8N1G2 835 aaKnown RBP15.98■□□□□ 0.15
SERF1B-204ENST00000506542 AIFM3Q96NN9 605 aa15.98■□□□□ 0.15
SERF1B-204ENST00000506542 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
SERF1B-204ENST00000506542 SLC25A27O95847 323 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 XRCC5P13010 732 aaKnown RBP15.97■□□□□ 0.15
SERF1B-204ENST00000506542 ALAS1P13196 640 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 UBXN2AP68543 259 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 GUCY1B3Q02153 619 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 SLC35G1Q2M3R5 365 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 PRAMEF19Q5SWL8 479 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 BTNL9Q6UXG8 535 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 TRPV1Q8NER1 839 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 DEFB118Q96PH6 123 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 PURBQ96QR8 312 aaKnown RBP15.97■□□□□ 0.15
SERF1B-204ENST00000506542 VAT1LQ9HCJ6 419 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 CNTNAP5Q8WYK1 1306 aa15.97■□□□□ 0.15
SERF1B-204ENST00000506542 ATP2A1O14983 1001 aa15.96■□□□□ 0.15
SERF1B-204ENST00000506542 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
SERF1B-204ENST00000506542 PLA2G6O60733 806 aa15.96■□□□□ 0.15
SERF1B-204ENST00000506542 DNM1Q05193 864 aaKnown RBP15.96■□□□□ 0.15
SERF1B-204ENST00000506542 RANBP17Q9H2T7 1088 aaKnown RBP15.96■□□□□ 0.15
SERF1B-204ENST00000506542 RNF146Q9NTX7 359 aa15.96■□□□□ 0.15
SERF1B-204ENST00000506542 LMBRD1Q9NUN5 540 aa15.96■□□□□ 0.15
SERF1B-204ENST00000506542 FRMPD3Q5JV73 1810 aa15.96■□□□□ 0.15
SERF1B-204ENST00000506542 PDE4DIPQ5VU43 2346 aa15.96■□□□□ 0.15
SERF1B-204ENST00000506542 STRNO43815 780 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 HOXC6P09630 235 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 GNAQP50148 359 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 CNTN2Q02246 1040 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 KCTD2Q14681 263 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 SRBD1Q8N5C6 995 aaKnown RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 TMEM87AQ8NBN3 555 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 GJB4Q9NTQ9 266 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 MAD2L2Q9UI95 211 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 CNPY2Q9Y2B0 182 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 PALM3A6NDB9 673 aaPredicted RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 PRPF40AO75400 957 aaKnown RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 PARP1P09874 1014 aaKnown RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 RGS19P49795 217 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 USH1GQ495M9 461 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 MAP3K21Q5TCX8 1036 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 ANO1Q5XXA6 986 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 KRT40Q6A162 431 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 ADGRF4Q8IZF3 695 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 U2AF1L4Q8WU68 220 aaKnown RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 MAML3Q96JK9 1138 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 TRERF1Q96PN7 1200 aa15.95■□□□□ 0.14
SERF1B-204ENST00000506542 PAK6Q9NQU5 681 aaPredicted RBP15.95■□□□□ 0.14
SERF1B-204ENST00000506542 NFIBO00712 420 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 TRAK2O60296 914 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 IGHA2P01877 340 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 KRT85P78386 507 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 TRIM29Q14134 588 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 PKN1Q16512 942 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 ZNF792Q3KQV3 632 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 FGD4Q96M96 766 aa15.94■□□□□ 0.14
SERF1B-204ENST00000506542 A1CFQ9NQ94 594 aaKnown RBP15.94■□□□□ 0.14
SERF1B-204ENST00000506542 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
SERF1B-204ENST00000506542 ICAM1P05362 532 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 NCLP19338 710 aaKnown RBP15.93■□□□□ 0.14
SERF1B-204ENST00000506542 OAZ1P54368 228 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 SKOR2Q2VWA4 1001 aaPredicted RBP15.93■□□□□ 0.14
SERF1B-204ENST00000506542 ABRAQ8N0Z2 381 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 ANKRD35Q8N283 1001 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 LZTS2Q9BRK4 669 aa15.93■□□□□ 0.14
SERF1B-204ENST00000506542 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms