RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ACAD9Q9H845 621 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 LY9Q9HBG7 655 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 VAT1LQ9HCJ6 419 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 CCPG1Q9ULG6 757 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 DIS3Q9Y2L1 958 aaKnown RBP8.46□□□□□ -1.06
GYPB-206ENST00000506516 RIPK3Q9Y572 518 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 SNX14Q9Y5W7 946 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 SLC12A7Q9Y666 1083 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 WDR19Q8NEZ3 1342 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 SH2B2O14492 632 aaPredicted RBP8.45□□□□□ -1.06
GYPB-206ENST00000506516 DDAH1O94760 285 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
GYPB-206ENST00000506516 INHAP05111 366 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 CAPN2P17655 700 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 KIF5BP33176 963 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 PBX2P40425 430 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 GNAQP50148 359 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
GYPB-206ENST00000506516 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
GYPB-206ENST00000506516 TROAPQ12815 778 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 TRAF1Q13077 416 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 GRM4Q14833 912 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 ADCK5Q3MIX3 580 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 RASGRP2Q7LDG7 609 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 ADGRF4Q8IZF3 695 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 ZNF654Q8IZM8 581 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 JAKMIP1Q96N16 626 aaKnown RBP8.45□□□□□ -1.06
GYPB-206ENST00000506516 TRERF1Q96PN7 1200 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 LZTS2Q9BRK4 669 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 LRRC2Q9BYS8 371 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 RNF208Q9H0X6 261 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 HMX1Q9NP08 348 aaPredicted RBP8.45□□□□□ -1.06
GYPB-206ENST00000506516 HOMER2Q9NSB8 354 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 RNF146Q9NTX7 359 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 MAD2L2Q9UI95 211 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 ZNF536O15090 1300 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 RPTORQ8N122 1335 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 LAMA4Q16363 1823 aa8.45□□□□□ -1.06
GYPB-206ENST00000506516 MYH4Q9Y623 1939 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 ARHGAP33O14559 1287 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 COBLO75128 1261 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 PGK2P07205 417 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 CCL5P13501 91 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 PSEN2P49810 448 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 SOX10P56693 466 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 MTFR1Q15390 333 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 CCL14Q16627 93 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 PROX2Q3B8N5 592 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 OLFML2BQ68BL8 750 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 PACS2Q86VP3 889 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 SGMS1Q86VZ5 419 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 MSL3Q8N5Y2 521 aaKnown RBP8.44□□□□□ -1.06
GYPB-206ENST00000506516 NPLOC4Q8TAT6 608 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 TRIB2Q92519 343 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
GYPB-206ENST00000506516 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 JMJD4Q9H9V9 463 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 SENP2Q9HC62 589 aa8.44□□□□□ -1.06
GYPB-206ENST00000506516 ZBTB43O43298 467 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 TFRCP02786 760 aaKnown RBP8.43□□□□□ -1.06
GYPB-206ENST00000506516 GJB1P08034 283 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 CASTP20810 708 aaKnown RBP8.43□□□□□ -1.06
GYPB-206ENST00000506516 RPS6KB1P23443 525 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 CACNB2Q08289 660 aaPredicted RBP8.43□□□□□ -1.06
GYPB-206ENST00000506516 PPP2R5BQ15173 497 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 CDC37Q16543 378 aaPredicted RBP8.43□□□□□ -1.06
GYPB-206ENST00000506516 ZNF792Q3KQV3 632 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 Q6ZUG5 572 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 NUDT18Q6ZVK8 323 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 RUFY3Q7L099 469 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 FBXO11Q86XK2 927 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 MCF2L2Q86YR7 1114 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 RGS22Q8NE09 1264 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 MAML3Q96JK9 1138 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 ZBED2Q9BTP6 218 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 AMNQ9BXJ7 453 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 TM6SF1Q9BZW5 370 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 MAF1Q9H063 256 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 UNC93B1Q9H1C4 597 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 CPVLQ9H3G5 476 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 RIOX1Q9H6W3 641 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 RBM28Q9NW13 759 aaKnown RBP8.43□□□□□ -1.06
GYPB-206ENST00000506516 MRPL11Q9Y3B7 192 aaKnown RBP8.43□□□□□ -1.06
GYPB-206ENST00000506516 CYP46A1Q9Y6A2 500 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 PFASO15067 1338 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 ABCB11O95342 1321 aa8.43□□□□□ -1.06
GYPB-206ENST00000506516 CENPFP49454 3210 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 DNAJC25-GNG10A0A024R161 153 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 CCDC196A0A1B0GTZ2 297 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 B4DLN1 442 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 ZBTB5O15062 677 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 SGPL1O95470 568 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 CPA1P15085 419 aa8.42□□□□□ -1.06
GYPB-206ENST00000506516 CNGA1P29973 690 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms