RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 FERMT2Q96AC1 680 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 PIGSQ96S52 555 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 SPC25Q9HBM1 224 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 VTA1Q9NP79 307 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
MED28-204ENST00000506409 PHF24Q9UPV7 400 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 LRRC37A2A6NM11 1700 aa18.05■□□□□ 0.48
MED28-204ENST00000506409 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.04■□□□□ 0.48
MED28-204ENST00000506409 CYTH3O43739 400 aa18.04■□□□□ 0.48
MED28-204ENST00000506409 PPP1R11O60927 126 aaPredicted RBP18.04■□□□□ 0.48
MED28-204ENST00000506409 REC8O95072 547 aa18.04■□□□□ 0.48
MED28-204ENST00000506409 C6orf222P0C671 652 aaPredicted RBP18.04■□□□□ 0.48
MED28-204ENST00000506409 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
MED28-204ENST00000506409 TBC1D5Q92609 795 aa18.04■□□□□ 0.48
MED28-204ENST00000506409 PDGFCQ9NRA1 345 aa18.04■□□□□ 0.48
MED28-204ENST00000506409 COLQQ9Y215 455 aaPredicted RBP18.04■□□□□ 0.48
MED28-204ENST00000506409 SLC12A7Q9Y666 1083 aa18.04■□□□□ 0.48
MED28-204ENST00000506409 MYADML2A6NDP7 307 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 B4DLN1 442 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 CALM1P0DP23 149 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 CALM2P0DP24 149 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 CALM3P0DP25 149 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 MRPL12P52815 198 aaKnown RBP18.03■□□□□ 0.48
MED28-204ENST00000506409 GJA9P57773 515 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 RTP1P59025 263 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 PDE4DQ08499 809 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 TRAF1Q13077 416 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 ADCK5Q3MIX3 580 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 TAPT1Q6NXT6 567 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 SLC39A5Q6ZMH5 540 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 DHX32Q7L7V1 743 aaKnown RBP18.03■□□□□ 0.48
MED28-204ENST00000506409 KLHDC9Q8NEP7 349 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 SYTL5Q8TDW5 730 aaPredicted RBP18.03■□□□□ 0.48
MED28-204ENST00000506409 TSEN34Q9BSV6 310 aaKnown RBP18.03■□□□□ 0.48
MED28-204ENST00000506409 UPF3AQ9H1J1 476 aaKnown RBP18.03■□□□□ 0.48
MED28-204ENST00000506409 DNAH12Q6ZR08 3092 aa18.03■□□□□ 0.48
MED28-204ENST00000506409 BAZ2BQ9UIF8 2168 aaKnown RBP18.03■□□□□ 0.48
MED28-204ENST00000506409 PNMA6FA0A0J9YX94 578 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 A0A1W2PQ45 241 aaPredicted RBP18.02■□□□□ 0.48
MED28-204ENST00000506409 A0A1W2PQY0 241 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 MOXD2PA6NHM9 499 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 CFBP00751 764 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 SMPD1P17405 629 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 SYN1P17600 705 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 RXRAP19793 462 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 EDNRBP24530 442 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 CST5P28325 142 aaPredicted RBP18.02■□□□□ 0.48
MED28-204ENST00000506409 HSPA4P34932 840 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 GNAQP50148 359 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 ACLYP53396 1101 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 KCNA10Q16322 511 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 IQSEC1Q6DN90 963 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 TLK2Q86UE8 772 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 SGMS1Q86VZ5 419 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 PCSK9Q8NBP7 692 aaKnown RBP18.02■□□□□ 0.48
MED28-204ENST00000506409 PIBF1Q8WXW3 757 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 SPZ1Q9BXG8 430 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 COL20A1Q9P218 1284 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 GNEQ9Y223 722 aaKnown RBP18.02■□□□□ 0.48
MED28-204ENST00000506409 ATP11BQ9Y2G3 1177 aa18.02■□□□□ 0.48
MED28-204ENST00000506409 OPLAHO14841 1288 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 HMGB1P09429 215 aaKnown RBP18.01■□□□□ 0.47
MED28-204ENST00000506409 IRX5P78411 483 aaPredicted RBP18.01■□□□□ 0.47
MED28-204ENST00000506409 EXOSC10Q01780 885 aaKnown RBP18.01■□□□□ 0.47
MED28-204ENST00000506409 SNX17Q15036 470 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 HABP4Q5JVS0 413 aaKnown RBP18.01■□□□□ 0.47
MED28-204ENST00000506409 GNASQ5JWF2 1037 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 CCSAPQ6IQ19 270 aaPredicted RBP18.01■□□□□ 0.47
MED28-204ENST00000506409 SYNE3Q6ZMZ3 975 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 MICU3Q86XE3 530 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
MED28-204ENST00000506409 TAAR1Q96RJ0 339 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 RMDN3Q96TC7 470 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 AP5M1Q9H0R1 490 aa18.01■□□□□ 0.47
MED28-204ENST00000506409 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
MED28-204ENST00000506409 SMARCA1P28370 1054 aa18■□□□□ 0.47
MED28-204ENST00000506409 HSD17B4P51659 736 aa18■□□□□ 0.47
MED28-204ENST00000506409 TRIM60Q495X7 471 aa18■□□□□ 0.47
MED28-204ENST00000506409 C1orf53Q5VUE5 145 aa18■□□□□ 0.47
MED28-204ENST00000506409 KCNB2Q92953 911 aa18■□□□□ 0.47
MED28-204ENST00000506409 RRP36Q96EU6 259 aaKnown RBP18■□□□□ 0.47
MED28-204ENST00000506409 WDR11Q9BZH6 1224 aa18■□□□□ 0.47
MED28-204ENST00000506409 STARD7Q9NQZ5 370 aa18■□□□□ 0.47
MED28-204ENST00000506409 CTAGE5O15320 804 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 DYNC1LI2O43237 492 aaPredicted RBP17.99■□□□□ 0.47
MED28-204ENST00000506409 ASGR1P07306 291 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 PTGS1P23219 599 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 NKX3-2P78367 333 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 BEX3Q00994 111 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 GHRHRQ02643 423 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 DUSP28Q4G0W2 176 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 TMEM63BQ5T3F8 832 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 ARHGEF16Q5VV41 709 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 APOA5Q6Q788 366 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 CMTR1Q8N1G2 835 aaKnown RBP17.99■□□□□ 0.47
MED28-204ENST00000506409 SRBD1Q8N5C6 995 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms