RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 RAG1P15918 1043 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 CCNG1P51959 295 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 RASSF7Q02833 373 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 HS2ST1Q7LGA3 356 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 SPATA7Q9P0W8 599 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 ACAD8Q9UKU7 415 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 ZDHHC9Q9Y397 364 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 SPO11Q9Y5K1 396 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 SCN9AQ15858 1988 aa2.59□□□□□ -1.99
NEDD4-205ENST00000506154 FIGNL2A6NMB9 653 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 FSBPO95073 299 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 TM4SF1P30408 202 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 MYBPC3Q14896 1274 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 ACBD5Q5T8D3 534 aaPredicted RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 CPLX2Q6PUV4 134 aaKnown RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 POTEHQ6S545 545 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 RPUSD2Q8IZ73 545 aaKnown RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 SVIPQ8NHG7 77 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 BICD2Q8TD16 824 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 NAF1Q96HR8 494 aaKnown RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 EPAS1Q99814 870 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 PCDHGB6Q9Y5F9 930 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 ERVV-2B6SEH9 535 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 ZBTB7BO15156 539 aaPredicted RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 FANCGO15287 622 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 SASH3O75995 380 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 COL6A1P12109 1028 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 KCNJ6P48051 423 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 DIXDC1Q155Q3 683 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 AKAP4Q5JQC9 854 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 TTLL5Q6EMB2 1281 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 LRSAM1Q6UWE0 723 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 FERMT3Q86UX7 667 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 FAM169BQ8N8A8 192 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 TGFBRAP1Q8WUH2 860 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 SLC2A13Q96QE2 648 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 IQCGQ9H095 443 aaKnown RBP2.59□□□□□ -2
NEDD4-205ENST00000506154 MUC3BQ9H195 1237 aa2.59□□□□□ -2
NEDD4-205ENST00000506154 PDS5AQ29RF7 1337 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 EIF3CLB5ME19 914 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 ATP5J2-PTCD1G3V325 749 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 BOLA2-SMG1P6H3BVE0 249 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PNMA6AP0CW24 399 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 CYP11B2P19099 503 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 FBLN1P23142 703 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 KIAA2012Q0VF49 1180 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 CCDC14Q49A88 953 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 RNF187Q5TA31 235 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 NEPROQ6NW34 567 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 INTS5Q6P9B9 1019 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 YTHDF3Q7Z739 585 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 ZNF516Q92618 1163 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 SYAP1Q96A49 352 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 EIF3CQ99613 913 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 GPN3Q9UHW5 284 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 FRMD4BQ9Y2L6 1034 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 NOSIPQ9Y314 301 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 CHD4Q14839 1912 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 FAM196BA6NMK8 535 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 EREGO14944 169 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ZEB2O60315 1214 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ARID5AQ03989 594 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 NSUN2Q08J23 767 aaKnown RBP eCLIP2.58□□□□□ -2
NEDD4-205ENST00000506154 PLEKHG6Q3KR16 790 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 SNAP47Q5SQN1 464 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ANKRD44Q8N8A2 993 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PCSK9Q8NBP7 692 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 C3orf20Q8ND61 904 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ACRBPQ8NEB7 543 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 IRGQQ8WZA9 623 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 EZH1Q92800 747 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 ZKSCAN4Q969J2 545 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 SDCCAG3Q96C92 435 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 SPSB2Q99619 263 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 FUT8Q9BYC5 575 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 POLMQ9NP87 494 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 MBIPQ9NS73 344 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 MAPK8IP1Q9UQF2 711 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PCDHB5Q9Y5E4 795 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ATRNL1Q5VV63 1379 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 CDHR2Q9BYE9 1310 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 A0A087WUV0 522 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 DIAPH2O60879 1101 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 SMC2O95347 1197 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ACTN2P35609 894 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 MAP3K12Q12852 859 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 SHROOM1Q2M3G4 852 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 CRY2Q49AN0 593 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 C15orf52Q6ZUT6 534 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 ZNF804AQ7Z570 1209 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 LIX1LQ8IVB5 337 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 CKAP2LQ8IYA6 745 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ACSBG1Q96GR2 724 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 USB1Q9BQ65 265 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 IL20Q9NYY1 176 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ELP1O95163 1332 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 IGHA2P01877 340 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 CSF1RP07333 972 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 HNRNPH1P31943 449 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms