RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 TRMT13Q9NUP7 481 aaKnown RBP9.76□□□□□ -0.85
SNF8-204ENST00000506104 PRR12Q9ULL5 1215 aa9.76□□□□□ -0.85
SNF8-204ENST00000506104 NOD1Q9Y239 953 aa9.76□□□□□ -0.85
SNF8-204ENST00000506104 LCTP09848 1927 aa9.76□□□□□ -0.85
SNF8-204ENST00000506104 MYH6P13533 1939 aa9.76□□□□□ -0.85
SNF8-204ENST00000506104 CTAGE5O15320 804 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 GTPBP6O43824 516 aaPredicted RBP9.75□□□□□ -0.85
SNF8-204ENST00000506104 CD4P01730 458 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 ACTN1P12814 892 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 ATP2A2P16615 1042 aaKnown RBP9.75□□□□□ -0.85
SNF8-204ENST00000506104 PDE4DQ08499 809 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 AKNAD1Q5T1N1 836 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 IQSEC1Q6DN90 963 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 TTBK2Q6IQ55 1244 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 ATXN2LQ8WWM7 1075 aaKnown RBP9.75□□□□□ -0.85
SNF8-204ENST00000506104 CYP39A1Q9NYL5 469 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 GNEQ9Y223 722 aaKnown RBP9.75□□□□□ -0.85
SNF8-204ENST00000506104 A0A0C4DFX4 3053 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 ZNF536O15090 1300 aa9.75□□□□□ -0.85
SNF8-204ENST00000506104 TFF2Q03403 129 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 TTLL4Q14679 1199 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 BRDTQ58F21 947 aaPredicted RBP9.74□□□□□ -0.85
SNF8-204ENST00000506104 TMEM67Q5HYA8 995 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
SNF8-204ENST00000506104 ARNTL2Q8WYA1 636 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 WDR11Q9BZH6 1224 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 KATNBL1Q9H079 304 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 WNT8AQ9H1J5 351 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 ALDH8A1Q9H2A2 487 aaPredicted RBP9.74□□□□□ -0.85
SNF8-204ENST00000506104 VTA1Q9NP79 307 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 POLR3EQ9NVU0 708 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 ADD3Q9UEY8 706 aaKnown RBP9.74□□□□□ -0.85
SNF8-204ENST00000506104 TNKSO95271 1327 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 MYH7BA7E2Y1 1941 aa9.74□□□□□ -0.85
SNF8-204ENST00000506104 CA3P07451 260 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 SUPT20HL2P0C7V6 817 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 CPT1AP50416 773 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 ALDH5A1P51649 535 aaPredicted RBP9.73□□□□□ -0.85
SNF8-204ENST00000506104 USH1GQ495M9 461 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 RASIP1Q5U651 963 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 TAPT1Q6NXT6 567 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 CHST3Q7LGC8 479 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 DCAF4Q8WV16 495 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 COPS5Q92905 334 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
SNF8-204ENST00000506104 DCTPP1Q9H773 170 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 PCDHA11Q9Y5I1 949 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 GRIN2DO15399 1336 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 RAD50Q92878 1312 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 PLIN4Q96Q06 1357 aa9.73□□□□□ -0.85
SNF8-204ENST00000506104 KIF28PB7ZC32 967 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 NFIBO00712 420 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
SNF8-204ENST00000506104 ICAM1P05362 532 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 MX1P20591 662 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 KCNQ1P51787 676 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 HAND2P61296 217 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 PPP2R5BQ15173 497 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 AAK1Q2M2I8 961 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 DUSP28Q4G0W2 176 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 TPRNQ4KMQ1 711 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 KRT40Q6A162 431 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 SLC30A10Q6XR72 485 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 RNF207Q6ZRF8 634 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
SNF8-204ENST00000506104 SLC43A3Q8NBI5 491 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 CRBNQ96SW2 442 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 MTG1Q9BT17 334 aaPredicted RBP9.72□□□□□ -0.85
SNF8-204ENST00000506104 ZBED2Q9BTP6 218 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 IL17RBQ9NRM6 502 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 SYNPO2Q9UMS6 1093 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 TTC41PQ6P2S7 1318 aa9.72□□□□□ -0.85
SNF8-204ENST00000506104 UNC80Q8N2C7 3258 aa9.71□□□□□ -0.85
SNF8-204ENST00000506104 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.85
SNF8-204ENST00000506104 SORBS3O60504 671 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 TXNP10599 105 aaKnown RBP9.71□□□□□ -0.86
SNF8-204ENST00000506104 KCNJ6P48051 423 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 ANKRD45Q5TZF3 282 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 VPS53Q5VIR6 699 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 SEPT14Q6ZU15 432 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 FAM122AQ96E09 287 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 SEZ6LQ9BYH1 1024 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 Q9Y3F1 56 aa9.71□□□□□ -0.86
SNF8-204ENST00000506104 TANC1Q9C0D5 1861 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
SNF8-204ENST00000506104 TET1Q8NFU7 2136 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 B4DLN1 442 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 TLL1O43897 1013 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
SNF8-204ENST00000506104 TOP1P11387 765 aaKnown RBP9.7□□□□□ -0.86
SNF8-204ENST00000506104 MRPL12P52815 198 aaKnown RBP9.7□□□□□ -0.86
SNF8-204ENST00000506104 PURAQ00577 322 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms