RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 GOLGA8HP0CJ92 632 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-222ENST00000506018 BRDTQ58F21 947 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-222ENST00000506018 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 EEPD1Q7L9B9 569 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 ANKRD33Q7Z3H0 272 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 TLK2Q86UE8 772 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-222ENST00000506018 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 BADQ92934 168 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 KATNBL1Q9H079 304 aa12.17□□□□□ -0.46
NR1I3-222ENST00000506018 ABCB11O95342 1321 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 CHMLP26374 656 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 NKX3-2P78367 333 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 PDE4DQ08499 809 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 TRAF1Q13077 416 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 CDC37Q16543 378 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-222ENST00000506018 FSCN1Q16658 493 aaKnown RBP12.16□□□□□ -0.46
NR1I3-222ENST00000506018 USH1GQ495M9 461 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 CCSAPQ6IQ19 270 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-222ENST00000506018 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 FBXO16Q8IX29 292 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-222ENST00000506018 RGS22Q8NE09 1264 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 MORC4Q8TE76 937 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 UBA5Q9GZZ9 404 aa12.16□□□□□ -0.46
NR1I3-222ENST00000506018 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-222ENST00000506018 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 ARVCFO00192 962 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 NKRFO15226 690 aaKnown RBP eCLIP12.15□□□□□ -0.46
NR1I3-222ENST00000506018 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
NR1I3-222ENST00000506018 ADCY6O43306 1168 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
NR1I3-222ENST00000506018 FPGSQ05932 587 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 FBXO11Q86XK2 927 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 ADGRF4Q8IZF3 695 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 NCOA7Q8NI08 942 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 GNEQ9Y223 722 aaKnown RBP12.15□□□□□ -0.46
NR1I3-222ENST00000506018 MRPL11Q9Y3B7 192 aaKnown RBP12.15□□□□□ -0.46
NR1I3-222ENST00000506018 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
NR1I3-222ENST00000506018 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 TRIM43BA6NCK2 446 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
NR1I3-222ENST00000506018 SMPD1P17405 629 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 CPT1AP50416 773 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 BEX3Q00994 111 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 FAAP100Q0VG06 881 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 TAPT1Q6NXT6 567 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 CLEC4DQ8WXI8 215 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 TRIM43Q96BQ3 446 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-222ENST00000506018 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-222ENST00000506018 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 ASTN1O14525 1302 aa12.14□□□□□ -0.47
NR1I3-222ENST00000506018 SGSM2O43147 1006 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 TIMP1P01033 207 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 CXCL17Q6UXB2 119 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
NR1I3-222ENST00000506018 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
NR1I3-222ENST00000506018 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 PDGFCQ9NRA1 345 aa12.13□□□□□ -0.47
NR1I3-222ENST00000506018 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 CYP21A2P08686 494 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 CDK7P50613 346 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-222ENST00000506018 PPIGQ13427 754 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-222ENST00000506018 ITGA7Q13683 1181 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 WTAPQ15007 396 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 SHHQ15465 462 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 ZNF697Q5TEC3 545 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 OR6J1Q8NGC5 347 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 RNPC3Q96LT9 517 aaKnown RBP12.12□□□□□ -0.47
NR1I3-222ENST00000506018 IL25Q9H293 177 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
NR1I3-222ENST00000506018 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
NR1I3-222ENST00000506018 BAZ2BQ9UIF8 2168 aaKnown RBP12.11□□□□□ -0.47
NR1I3-222ENST00000506018 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
NR1I3-222ENST00000506018 E7EWF7 191 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 CTAGE5O15320 804 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 KPNA6O60684 536 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 EDNRBP24530 442 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 PTH1RQ03431 593 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 SEC23AQ15436 765 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 ARHGEF16Q5VV41 709 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-222ENST00000506018 MFSD5Q6N075 450 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
NR1I3-222ENST00000506018 CYB5R4Q7L1T6 521 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms