RNA–Protein interactions for RNA: ENST00000505854.5

SNX2-202, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 908 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-202ENST00000505854 NEK1Q96PY6 1258 aa21.26■□□□□ 0.99
SNX2-202ENST00000505854 UPF3AQ9H1J1 476 aaKnown RBP21.26■□□□□ 0.99
SNX2-202ENST00000505854 LRRC37A2A6NM11 1700 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 ADCY6O43306 1168 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 GJA9P57773 515 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
SNX2-202ENST00000505854 SLC35G1Q2M3R5 365 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 TAPT1Q6NXT6 567 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 FERMT2Q96AC1 680 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 LZTS2Q9BRK4 669 aa21.25■□□□□ 0.99
SNX2-202ENST00000505854 COLQQ9Y215 455 aaPredicted RBP21.25■□□□□ 0.99
SNX2-202ENST00000505854 DDX49Q9Y6V7 483 aaKnown RBP21.25■□□□□ 0.99
SNX2-202ENST00000505854 PNMA6FA0A0J9YX94 578 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 CYTH3O43739 400 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 REC8O95072 547 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 CALM1P0DP23 149 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 CALM2P0DP24 149 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 CALM3P0DP25 149 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 CST5P28325 142 aaPredicted RBP21.24■□□□□ 0.99
SNX2-202ENST00000505854 SMARCA1P28370 1054 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 NOL8Q76FK4 1167 aaKnown RBP21.24■□□□□ 0.99
SNX2-202ENST00000505854 EEPD1Q7L9B9 569 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 FBXO16Q8IX29 292 aaPredicted RBP21.24■□□□□ 0.99
SNX2-202ENST00000505854 RASEFQ8IZ41 740 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 TBC1D5Q92609 795 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 PIGSQ96S52 555 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 PCDHA1Q9Y5I3 950 aa21.24■□□□□ 0.99
SNX2-202ENST00000505854 MOXD2PA6NHM9 499 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 PPP1R11O60927 126 aaPredicted RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 C6orf222P0C671 652 aaPredicted RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 EDNRBP24530 442 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 GNAQP50148 359 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 ACLYP53396 1101 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 RTP1P59025 263 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 NKX3-2P78367 333 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 PDE4DQ08499 809 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 SNX17Q15036 470 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 KCNA10Q16322 511 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 HABP4Q5JVS0 413 aaKnown RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 C1orf53Q5VUE5 145 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 CCSAPQ6IQ19 270 aaPredicted RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 CHRDL2Q6WN34 429 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 SGMS1Q86VZ5 419 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 HOMER1Q86YM7 354 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 SAMD3Q8N6K7 520 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 PCSK9Q8NBP7 692 aaKnown RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 SYTL5Q8TDW5 730 aaPredicted RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 KCNB2Q92953 911 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 MYL10Q9BUA6 226 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 SPZ1Q9BXG8 430 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 PDGFCQ9NRA1 345 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 MAP3K20Q9NYL2 800 aaKnown RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 ZMYND8Q9ULU4 1186 aaPredicted RBP21.23■□□□□ 0.99
SNX2-202ENST00000505854 SLC12A7Q9Y666 1083 aa21.23■□□□□ 0.99
SNX2-202ENST00000505854 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.22■□□□□ 0.99
SNX2-202ENST00000505854 A0A1W2PQ45 241 aaPredicted RBP21.22■□□□□ 0.99
SNX2-202ENST00000505854 A0A1W2PQY0 241 aa21.22■□□□□ 0.99
SNX2-202ENST00000505854 HMGB1P09429 215 aaKnown RBP21.22■□□□□ 0.99
SNX2-202ENST00000505854 EXOSC10Q01780 885 aaKnown RBP21.22■□□□□ 0.99
SNX2-202ENST00000505854 GNASQ5JWF2 1037 aa21.22■□□□□ 0.99
SNX2-202ENST00000505854 NSUN6Q8TEA1 469 aaKnown RBP21.22■□□□□ 0.99
SNX2-202ENST00000505854 LRRC2Q9BYS8 371 aa21.22■□□□□ 0.99
SNX2-202ENST00000505854 AP5M1Q9H0R1 490 aa21.22■□□□□ 0.99
SNX2-202ENST00000505854 GNEQ9Y223 722 aaKnown RBP21.22■□□□□ 0.99
SNX2-202ENST00000505854 Q9Y3F1 56 aa21.22■□□□□ 0.99
SNX2-202ENST00000505854 RBM47A0AV96 593 aaKnown RBP21.21■□□□□ 0.99
SNX2-202ENST00000505854 CFBP00751 764 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 SMPD1P17405 629 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 GHRHRQ02643 423 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 TAAR1Q96RJ0 339 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 IWS1Q96ST2 819 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 ATP11BQ9Y2G3 1177 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 TRIOBPQ9H2D6 2365 aa21.21■□□□□ 0.99
SNX2-202ENST00000505854 MYADML2A6NDP7 307 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 OPLAHO14841 1288 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 SYN1P17600 705 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 HSPA4P34932 840 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 HSD17B4P51659 736 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 DUSP28Q4G0W2 176 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 SYNE3Q6ZMZ3 975 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 TLK2Q86UE8 772 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 RRP36Q96EU6 259 aaKnown RBP21.2■□□□□ 0.98
SNX2-202ENST00000505854 RMDN3Q96TC7 470 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 WDR11Q9BZH6 1224 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 PRO3102Q9H379 93 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 COL20A1Q9P218 1284 aa21.2■□□□□ 0.98
SNX2-202ENST00000505854 CTAGE5O15320 804 aa21.19■□□□□ 0.98
SNX2-202ENST00000505854 EPB41L2O43491 1005 aaKnown RBP21.19■□□□□ 0.98
SNX2-202ENST00000505854 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
SNX2-202ENST00000505854 FANCBQ8NB91 859 aa21.19■□□□□ 0.98
SNX2-202ENST00000505854 ELP1O95163 1332 aa21.19■□□□□ 0.98
SNX2-202ENST00000505854 DYNC1LI2O43237 492 aaPredicted RBP21.18■□□□□ 0.98
SNX2-202ENST00000505854 ASGR1P07306 291 aa21.18■□□□□ 0.98
SNX2-202ENST00000505854 FSCN1Q16658 493 aaKnown RBP21.18■□□□□ 0.98
SNX2-202ENST00000505854 TRIM60Q495X7 471 aa21.18■□□□□ 0.98
SNX2-202ENST00000505854 ARHGEF16Q5VV41 709 aa21.18■□□□□ 0.98
SNX2-202ENST00000505854 SRBD1Q8N5C6 995 aaKnown RBP21.18■□□□□ 0.98
SNX2-202ENST00000505854 SCFD2Q8WU76 684 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms