RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 CTAGE5O15320 804 aa29.55■■■□□ 2.32
PVT1-201ENST00000504719 CHST3Q7LGC8 479 aa29.55■■■□□ 2.32
PVT1-201ENST00000504719 MB21D2Q8IYB1 491 aaPredicted RBP29.55■■■□□ 2.32
PVT1-201ENST00000504719 MAF1Q9H063 256 aa29.55■■■□□ 2.32
PVT1-201ENST00000504719 SENP2Q9HC62 589 aa29.55■■■□□ 2.32
PVT1-201ENST00000504719 STARD7Q9NQZ5 370 aa29.55■■■□□ 2.32
PVT1-201ENST00000504719 KLRF2D3W0D1 207 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 DHX16O60231 1041 aaKnown RBP29.54■■■□□ 2.32
PVT1-201ENST00000504719 ASGR1P07306 291 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 SMPD1P17405 629 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 ANTXR2P58335 489 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 TLE2Q04725 743 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 WTAPQ15007 396 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 SART3Q15020 963 aaKnown RBP29.54■■■□□ 2.32
PVT1-201ENST00000504719 NOL8Q76FK4 1167 aaKnown RBP29.54■■■□□ 2.32
PVT1-201ENST00000504719 PDLIM7Q9NR12 457 aa29.54■■■□□ 2.32
PVT1-201ENST00000504719 GRM4Q14833 912 aa29.53■■■□□ 2.32
PVT1-201ENST00000504719 GNASQ5JWF2 1037 aa29.53■■■□□ 2.32
PVT1-201ENST00000504719 FBXO11Q86XK2 927 aa29.53■■■□□ 2.32
PVT1-201ENST00000504719 DNERQ8NFT8 737 aa29.53■■■□□ 2.32
PVT1-201ENST00000504719 IGDCC4Q8TDY8 1250 aa29.53■■■□□ 2.32
PVT1-201ENST00000504719 TLK2Q86UE8 772 aa29.52■■■□□ 2.32
PVT1-201ENST00000504719 TDHQ8IZJ6 230 aa29.52■■■□□ 2.32
PVT1-201ENST00000504719 TBC1D5Q92609 795 aa29.52■■■□□ 2.32
PVT1-201ENST00000504719 MTMR8Q96EF0 704 aa29.52■■■□□ 2.32
PVT1-201ENST00000504719 LBHD1Q9BQE6 289 aaPredicted RBP29.52■■■□□ 2.32
PVT1-201ENST00000504719 PRDM5Q9NQX1 630 aaPredicted RBP29.52■■■□□ 2.32
PVT1-201ENST00000504719 Q9Y3F1 56 aa29.52■■■□□ 2.32
PVT1-201ENST00000504719 ELP1O95163 1332 aa29.51■■■□□ 2.32
PVT1-201ENST00000504719 EDNRBP24530 442 aa29.51■■■□□ 2.31
PVT1-201ENST00000504719 BEX3Q00994 111 aa29.51■■■□□ 2.31
PVT1-201ENST00000504719 TMEM67Q5HYA8 995 aa29.51■■■□□ 2.31
PVT1-201ENST00000504719 TMEM63BQ5T3F8 832 aa29.51■■■□□ 2.31
PVT1-201ENST00000504719 SH3RF1Q7Z6J0 888 aa29.51■■■□□ 2.31
PVT1-201ENST00000504719 GLT1D1Q96MS3 346 aa29.51■■■□□ 2.31
PVT1-201ENST00000504719 MRPL11Q9Y3B7 192 aaKnown RBP29.51■■■□□ 2.31
PVT1-201ENST00000504719 BAZ2BQ9UIF8 2168 aaKnown RBP29.5■■■□□ 2.31
PVT1-201ENST00000504719 TRIM43BA6NCK2 446 aa29.5■■■□□ 2.31
PVT1-201ENST00000504719 SLC27A2O14975 620 aa29.5■■■□□ 2.31
PVT1-201ENST00000504719 DYNC1LI2O43237 492 aaPredicted RBP29.5■■■□□ 2.31
PVT1-201ENST00000504719 PTGS1P23219 599 aa29.5■■■□□ 2.31
PVT1-201ENST00000504719 TROAPQ12815 778 aa29.5■■■□□ 2.31
PVT1-201ENST00000504719 NECTIN1Q15223 517 aa29.5■■■□□ 2.31
PVT1-201ENST00000504719 TRIM43Q96BQ3 446 aaPredicted RBP29.5■■■□□ 2.31
PVT1-201ENST00000504719 MPHOSPH6Q99547 160 aaKnown RBP29.5■■■□□ 2.31
PVT1-201ENST00000504719 AP5M1Q9H0R1 490 aa29.5■■■□□ 2.31
PVT1-201ENST00000504719 RBM47A0AV96 593 aaKnown RBP29.49■■■□□ 2.31
PVT1-201ENST00000504719 SOX1O00570 391 aaPredicted RBP29.49■■■□□ 2.31
PVT1-201ENST00000504719 PQBP1O60828 265 aaKnown RBP29.49■■■□□ 2.31
PVT1-201ENST00000504719 CLTBP09497 229 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 PDE4DQ08499 809 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 DUSP28Q4G0W2 176 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 ANKRD33Q7Z3H0 272 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 MCF2L2Q86YR7 1114 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 TOX2Q96NM4 488 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 MTA3Q9BTC8 594 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 AMNQ9BXJ7 453 aa29.49■■■□□ 2.31
PVT1-201ENST00000504719 ZBTB5O15062 677 aa29.48■■■□□ 2.31
PVT1-201ENST00000504719 SLC35G1Q2M3R5 365 aa29.48■■■□□ 2.31
PVT1-201ENST00000504719 CREB3L3Q68CJ9 461 aa29.48■■■□□ 2.31
PVT1-201ENST00000504719 SYTL5Q8TDW5 730 aaPredicted RBP29.48■■■□□ 2.31
PVT1-201ENST00000504719 WDR11Q9BZH6 1224 aa29.48■■■□□ 2.31
PVT1-201ENST00000504719 RIOX1Q9H6W3 641 aa29.48■■■□□ 2.31
PVT1-201ENST00000504719 B4DLN1 442 aa29.47■■■□□ 2.31
PVT1-201ENST00000504719 CDK7P50613 346 aa29.47■■■□□ 2.31
PVT1-201ENST00000504719 MRPL12P52815 198 aaKnown RBP29.47■■■□□ 2.31
PVT1-201ENST00000504719 FSCN1Q16658 493 aaKnown RBP29.47■■■□□ 2.31
PVT1-201ENST00000504719 CATIPQ7Z7H3 387 aa29.47■■■□□ 2.31
PVT1-201ENST00000504719 VTI1AQ96AJ9 217 aa29.47■■■□□ 2.31
PVT1-201ENST00000504719 LY9Q9HBG7 655 aa29.47■■■□□ 2.31
PVT1-201ENST00000504719 A0A0U1RQG5 324 aaPredicted RBP29.46■■■□□ 2.31
PVT1-201ENST00000504719 PPP1R11O60927 126 aaPredicted RBP29.46■■■□□ 2.31
PVT1-201ENST00000504719 FAAP100Q0VG06 881 aa29.46■■■□□ 2.31
PVT1-201ENST00000504719 LRIT3Q3SXY7 679 aa29.46■■■□□ 2.31
PVT1-201ENST00000504719 BADQ92934 168 aa29.46■■■□□ 2.31
PVT1-201ENST00000504719 TAAR1Q96RJ0 339 aa29.46■■■□□ 2.31
PVT1-201ENST00000504719 COL20A1Q9P218 1284 aa29.46■■■□□ 2.31
PVT1-201ENST00000504719 DCDC2CA8MYV0 355 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 ARVCFO00192 962 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 KIAA0355O15063 1070 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 PRC1O43663 620 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 ZEB2O60315 1214 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 MCM5P33992 734 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 LRCH3Q96II8 777 aa29.45■■■□□ 2.31
PVT1-201ENST00000504719 MROH7Q68CQ1 1323 aa29.45■■■□□ 2.3
PVT1-201ENST00000504719 SZT2Q5T011 3432 aa29.44■■■□□ 2.3
PVT1-201ENST00000504719 OPLAHO14841 1288 aa29.44■■■□□ 2.3
PVT1-201ENST00000504719 CYTH3O43739 400 aa29.44■■■□□ 2.3
PVT1-201ENST00000504719 CABYRO75952 493 aa29.44■■■□□ 2.3
PVT1-201ENST00000504719 PIGSQ96S52 555 aa29.44■■■□□ 2.3
PVT1-201ENST00000504719 MAP3K14Q99558 947 aa29.44■■■□□ 2.3
PVT1-201ENST00000504719 GPHNQ9NQX3 736 aaPredicted RBP29.44■■■□□ 2.3
PVT1-201ENST00000504719 KIAA1217Q5T5P2 1943 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 ITGB8P26012 769 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 GHRHRQ02643 423 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 COL9A3Q14050 684 aaPredicted RBP29.43■■■□□ 2.3
PVT1-201ENST00000504719 CXCL17Q6UXB2 119 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 HOMER1Q86YM7 354 aa29.43■■■□□ 2.3
PVT1-201ENST00000504719 NSUN6Q8TEA1 469 aaKnown RBP29.43■■■□□ 2.3
PVT1-201ENST00000504719 TMEM87BQ96K49 555 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms