RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 LOC102724428A0A0B4J2F2 783 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 GOLGA8AA7E2F4 631 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 IFIT3O14879 490 aaKnown RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 THBS1P07996 1170 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 XBP1P17861 261 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 SYKP43405 635 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 CRKLP46109 303 aaKnown RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 SIK1P57059 783 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 CEBPZQ03701 1054 aaKnown RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 PI16Q6UXB8 463 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 FCHSD1Q86WN1 690 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 NOSTRINQ8IVI9 506 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 PDCL2Q8N4E4 241 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 CCDC112Q8NEF3 446 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 CACTINQ8WUQ7 758 aaKnown RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 PYM1Q9BRP8 204 aaKnown RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 C2orf49Q9BVC5 232 aaPredicted RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 DENND2AQ9ULE3 1009 aa10.08□□□□□ -0.8
CASC9-201ENST00000504531 NAP1L2Q9ULW6 460 aaPredicted RBP10.08□□□□□ -0.8
CASC9-201ENST00000504531 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
CASC9-201ENST00000504531 A0A1B0GVL5 298 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 B4E1Z4 1266 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 GPR25O00155 361 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 MBD4O95243 580 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 MMP1P03956 469 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 POLR3DP05423 398 aaPredicted RBP10.07□□□□□ -0.8
CASC9-201ENST00000504531 PFKFB1P16118 471 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 WEE1P30291 646 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 KRT76Q01546 638 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 UBAP2LQ14157 1087 aaKnown RBP10.07□□□□□ -0.8
CASC9-201ENST00000504531 WTAPQ15007 396 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 RTN1Q16799 776 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 RNFT1Q5M7Z0 435 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 NFXL1Q6ZNB6 911 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 CERS3Q8IU89 383 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 SYNE4Q8N205 404 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
CASC9-201ENST00000504531 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 MLKLQ8NB16 471 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 SPC24Q8NBT2 197 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 ESR2Q92731 530 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 EPB41L4AQ9HCS5 686 aaPredicted RBP10.07□□□□□ -0.8
CASC9-201ENST00000504531 NEUROD4Q9HD90 331 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 ATXN7L1Q9ULK2 861 aaPredicted RBP10.07□□□□□ -0.8
CASC9-201ENST00000504531 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
CASC9-201ENST00000504531 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 PRPF3O43395 683 aaKnown RBP10.06□□□□□ -0.8
CASC9-201ENST00000504531 WDHD1O75717 1129 aaPredicted RBP10.06□□□□□ -0.8
CASC9-201ENST00000504531 CDC27P30260 824 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
CASC9-201ENST00000504531 GAS6Q14393 721 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 NCAPHQ15003 741 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 HIF1AQ16665 826 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 CCDC178Q5BJE1 867 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 NBPF11Q86T75 865 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 FANCBQ8NB91 859 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 STK32AQ8WU08 396 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 ANKRD7Q92527 254 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 FTOQ9C0B1 505 aaKnown RBP eCLIP10.06□□□□□ -0.8
CASC9-201ENST00000504531 PHACTR1Q9C0D0 580 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.8
CASC9-201ENST00000504531 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 PCDHGC4Q9Y5F7 938 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 SRPRBQ9Y5M8 271 aaKnown RBP10.06□□□□□ -0.8
CASC9-201ENST00000504531 SLC4A4Q9Y6R1 1079 aa10.06□□□□□ -0.8
CASC9-201ENST00000504531 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
CASC9-201ENST00000504531 ORC4O43929 436 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
CASC9-201ENST00000504531 DDAH1O94760 285 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SKILP12757 684 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 TRAPPC10P48553 1259 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SARSP49591 514 aaKnown RBP10.05□□□□□ -0.8
CASC9-201ENST00000504531 CCZ1BP86790 482 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 CCZ1P86791 482 aaPredicted RBP10.05□□□□□ -0.8
CASC9-201ENST00000504531 MYL5Q02045 173 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SRSF11Q05519 484 aaKnown RBP10.05□□□□□ -0.8
CASC9-201ENST00000504531 CHRNDQ07001 517 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 PPARAQ07869 468 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SEC23AQ15436 765 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SBK1Q52WX2 424 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 CAVIN4Q5BKX8 364 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SHC4Q6S5L8 630 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 FBXO33Q7Z6M2 555 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 ANKRD18AQ8IVF6 992 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 AOPEPQ8N6M6 819 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 ZSCAN1Q8NBB4 408 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 SPATA20Q8TB22 786 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 VTI1AQ96AJ9 217 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 FEZ1Q99689 392 aa10.05□□□□□ -0.8
CASC9-201ENST00000504531 ZCCHC2Q9C0B9 1178 aaKnown RBP10.05□□□□□ -0.8
CASC9-201ENST00000504531 ANKRD2Q9GZV1 360 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms